contig_metadata
13 rows where bioproject = "PRJNA795983" and tax_phylum = "Thermodesulfobacteriota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 3331402 | 3331402 | PRJNA795983_S_NODE_8023_length_421_cov_1.477011_g7898_i0 | PRJNA795983 | 8023 | 421 | 1.477011 | 6.21821631 | Desulfococcaceae bacterium HSG8 | 3055603 | Bacteria | Bacteria | 125 | 2.2000000000000002e-30 | NR | MDM8524962.1 | 3055603 | g7898 | i0 | 51.2 | 0.862232779097387 | 121 | 59 | 86.2 | 0 | 3 | 365 | 322 | 442 | MDM8524962.1 S8 family serine peptidase [Desulfococcaceae bacterium HSG8] | diamond | 363 | 125 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfobacteria | Desulfobacterales | Desulfococcaceae | Desulfococcaceae bacterium HSG8 | |||
| 8869700 | 8869700 | PRJNA795983_S_NODE_31867_length_262_cov_1.227513_g31742_i0 | PRJNA795983 | 31867 | 262 | 1.227513 | 3.21608406 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 147 | 8.57e-40 | NR | WP_034608627.1 | 81425 | g31742 | i0 | 79.1 | 26.816793893129802 | 86 | 18 | 98.5 | 0 | 5 | 262 | 62 | 147 | WP_034608627.1 adenosylhomocysteinase [Desulfovibrio aminophilus] | diamond | 7026 | 148 | 0.993243243243243 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfovibrionia | Desulfovibrionales | Desulfovibrionaceae | Desulfovibrio | Desulfovibrio aminophilus | ||
| 13533741 | 13533741 | PRJNA795983_S_NODE_28771_length_272_cov_1.140704_g28646_i0 | PRJNA795983 | 28771 | 272 | 1.140704 | 3.10271488 | root | 1 | Root_unresolved | Root_unresolved | 131 | 4.05e-34 | NR | PLX89983.1 | 892 | g28646 | i0 | 72.7 | 23.4154411764706 | 88 | 23 | 97.1 | 1 | 272 | 9 | 327 | 413 | PLX89983.1 MAG: adenosylhomocysteinase, partial [Desulfuromonas sp.] | diamond | 6369 | 132 | 0.992424242424242 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfuromonadia | Desulfuromonadales | Desulfuromonadaceae | Desulfuromonas | Desulfuromonas sp. | ||
| 27370199 | 27370199 | PRJNA795983_S_NODE_17823_length_319_cov_1.577236_g17698_i0 | PRJNA795983 | 17823 | 319 | 1.577236 | 5.03138284 | Thermodesulfobacteriota bacterium | 2202153 | Bacteria | Bacteria | 43.1 | 0.049 | NR | GJM17643.1 | 2202153 | g17698 | i0 | 25.9 | 0.761755485893417 | 81 | 59 | 75.2 | 1 | 298 | 59 | 133 | 213 | GJM17643.1 MAG: hypothetical protein DHS20C13_29700 [Thermodesulfobacteriota bacterium] | diamond | 243 | 43.1 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Thermodesulfobacteriota bacterium | ||||||
| 27568381 | 27568381 | PRJNA795983_S_NODE_17084_length_323_cov_1.848000_g16959_i0 | PRJNA795983 | 17084 | 323 | 1.848 | 5.96904 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 76.6 | 1.21e-13 | NR | OGE24405.1 | 1797756 | g16959 | i0 | 73.3 | 1.38390092879257 | 45 | 12 | 41.8 | 0 | 159 | 293 | 528 | 572 | OGE24405.1 MAG: hypothetical protein A3J42_06930 [Candidatus Dadabacteria bacterium RIFCSPHIGHO2_12_FULL_53_21] | diamond | 447 | 76.6 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Candidatus Dadabacteria | Candidatus Dadabacteria bacterium RIFCSPHIGHO2_12_FULL_53_21 | |||||
| 28506588 | 28506588 | PRJNA795983_S_NODE_16527_length_327_cov_1.389764_g16402_i0 | PRJNA795983 | 16527 | 327 | 1.389764 | 4.54452828 | Candidatus Magnetoglobus multicellularis str. Araruama | 890399 | Bacteria | Bacteria | 44.7 | 0.0168 | NR | ETR65097.1 | 890399 | g16402 | i0 | 32.5 | 0.73394495412844 | 80 | 50 | 69.7 | 2 | 292 | 65 | 83 | 162 | ETR65097.1 MAG: hypothetical protein OMM_14826, partial [Candidatus Magnetoglobus multicellularis str. Araruama] | diamond | 240 | 44.7 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfobacteria | Desulfobacterales | Desulfobacteraceae | Candidatus Magnetoglobus | Candidatus Magnetoglobus multicellularis | ||
| 28696187 | 28696187 | PRJNA795983_S_NODE_14347_length_342_cov_3.684015_g14222_i0 | PRJNA795983 | 14347 | 342 | 3.684015 | 12.5993313 | Desulfobulbaceae bacterium | 2053307 | Bacteria | Bacteria | 63.5 | 6.02e-9 | NR | MBS4000095.1 | 2053307 | g14222 | i0 | 64.6 | 0.421052631578947 | 48 | 15 | 40.4 | 1 | 205 | 342 | 131 | 178 | MBS4000095.1 glutamine synthetase III [Desulfobulbaceae bacterium] | diamond | 144 | 63.5 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfobulbia | Desulfobulbales | Desulfobulbaceae | Desulfobulbaceae bacterium | |||
| 28822006 | 28822006 | PRJNA795983_S_NODE_37508_length_248_cov_1.845714_g37383_i0 | PRJNA795983 | 37508 | 248 | 1.845714 | 4.57737072 | Desulfobacteraceae bacterium | 2049433 | Bacteria | Bacteria | 55.8 | 9.44e-7 | NR | RJQ83914.1 | 2049433 | g37383 | i0 | 39.7 | 1.69354838709677 | 78 | 44 | 94.4 | 3 | 5 | 238 | 129 | 203 | RJQ83914.1 MAG: hypothetical protein C4519_05855 [Desulfobacteraceae bacterium] | diamond | 420 | 55.8 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfobacteria | Desulfobacterales | Desulfobacteraceae | Desulfobacteraceae bacterium | |||
| 29390788 | 29390788 | PRJNA795983_S_NODE_19789_length_308_cov_2.697872_g19664_i0 | PRJNA795983 | 19789 | 308 | 2.697872 | 8.30944576 | Smithella sp. SDB | 1735324 | Bacteria | Bacteria | 73.9 | 8.73e-13 | NR | KQC11342.1 | 1735324 | g19664 | i0 | 42.6 | 0.915584415584416 | 94 | 51 | 88.6 | 1 | 308 | 36 | 559 | 652 | KQC11342.1 MAG: hypothetical protein APR62_10075 [Smithella sp. SDB] | diamond | 282 | 73.9 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Syntrophia | Syntrophales | Smithellaceae | Smithella | Smithella sp. SDB | ||
| 30843831 | 30843831 | PRJNA795983_S_NODE_434_length_1263_cov_3.517647_g397_i0 | PRJNA795983 | 434 | 1263 | 3.517647 | 44.42788161 | Smithella sp. | 2053614 | Bacteria | Bacteria | 97.1 | 1.83e-17 | NR | MBP9014409.1 | 2053614 | g397 | i0 | 28.6 | 0.781472684085511 | 329 | 188 | 77.9 | 14 | 1244 | 261 | 544 | 826 | MBP9014409.1 carboxypeptidase regulatory-like domain-containing protein [Smithella sp.] | diamond | 987 | 97.1 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Syntrophia | Syntrophales | Smithellaceae | Smithella | Smithella sp. | ||
| 30947842 | 30947842 | PRJNA795983_S_NODE_13414_length_350_cov_1.895307_g13289_i0 | PRJNA795983 | 13414 | 350 | 1.895307 | 6.6335745 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 162 | 9e-46 | NR | MEW6350612.1 | 2202153 | g13289 | i0 | 56.9 | 7.94571428571429 | 116 | 50 | 99.4 | 0 | 3 | 350 | 131 | 246 | MEW6350612.1 alanine--glyoxylate aminotransferase family protein [Thermodesulfobacteriota bacterium] | diamond | 2781 | 163 | 0.993865030674847 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Thermodesulfobacteriota bacterium | ||||||
| 31065131 | 31065131 | PRJNA795983_S_NODE_25175_length_284_cov_2.497630_g25050_i0 | PRJNA795983 | 25175 | 284 | 2.49763 | 7.0932692 | Syntrophus sp. SKADARSKE-3 | 3029837 | Bacteria | Bacteria | 63.5 | 2.77e-9 | NR | MDQ5987783.1 | 3029837 | g25050 | i0 | 44.2 | 0.813380281690141 | 77 | 40 | 78.2 | 1 | 267 | 46 | 280 | 356 | MDQ5987783.1 hypothetical protein [Syntrophus sp. SKADARSKE-3] | diamond | 231 | 63.5 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Syntrophia | Syntrophales | Syntrophaceae | Syntrophus | Syntrophus sp. SKADARSKE-3 | ||
| 32393404 | 32393404 | PRJNA795983_S_NODE_37679_length_248_cov_1.320000_g37554_i0 | PRJNA795983 | 37679 | 248 | 1.32 | 3.2736 | Desulfonatronum thioautotrophicum | 617001 | Bacteria | Bacteria | 45.4 | 0.00445 | NR | WP_244148816.1 | 617001 | g37554 | i0 | 51.2 | 0.495967741935484 | 41 | 20 | 49.6 | 0 | 63 | 185 | 42 | 82 | WP_244148816.1 molybdopterin-dependent oxidoreductase [Desulfonatronum thioautotrophicum] | diamond | 123 | 45.4 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfovibrionia | Desulfovibrionales | Desulfonatronaceae | Desulfonatronum | Desulfonatronum thioautotrophicum |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;