RNAquarium Metadata Server
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contig_metadata

5 rows where bioproject = "PRJNA795983" and tax_phylum = "Preaxostyla"

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tax_superkingdom 1

tax_phylum 1

  • Preaxostyla · 5 ✖

tax_clade 1

bioproject 1

  • PRJNA795983 · 5 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5883797 5883797 PRJNA795983_S_NODE_43705_length_236_cov_2.509202_g43580_i0 PRJNA795983 43705 236 2.509202 5.92171672 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 129 6.82e-35   NR WCZ58380.1 1709329 g43580 i0 70.1 14.4533898305085 77 23 97.9 0 231 1 43 119 WCZ58380.1 60S ribosomal protein L8 [Paratrimastix eleionoma] diamond 3411 130 0.992307692307692 Eukaryota Metamonada   Preaxostyla     Paratrimastigidae Paratrimastix Paratrimastix eleionoma
25006510 25006510 PRJNA795983_S_NODE_26880_length_278_cov_1.497561_g26755_i0 PRJNA795983 26880 278 1.497561 4.16321958 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 142 5.559999999999999e-37   NR KAJ4457112.1 342808 g26755 i0 74.4 16.3920863309353 90 23 97.1 0 7 276 426 515 KAJ4457112.1 putative DNA-directed RNA polymerase II subunit RPB2 [Paratrimastix pyriformis] diamond 4557 142 1 Eukaryota Metamonada   Preaxostyla     Paratrimastigidae Paratrimastix Paratrimastix pyriformis
27442483 27442483 PRJNA795983_S_NODE_20823_length_303_cov_2.308696_g20698_i0 PRJNA795983 20823 303 2.308696 6.99534888 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 104 1.43e-23   NR KAJ4458763.1 342808 g20698 i0 50 6.74257425742574 100 50 99 0 2 301 297 396 KAJ4458763.1 putative 3'; 5'-cyclic-nucleotide phosphodiesterase regA [Paratrimastix pyriformis] diamond 2043 105 0.990476190476191 Eukaryota Metamonada   Preaxostyla     Paratrimastigidae Paratrimastix Paratrimastix pyriformis
27915667 27915667 PRJNA795983_S_NODE_17925_length_318_cov_4.604082_g17800_i0 PRJNA795983 17925 318 4.604082 14.64098076 root 1 Root_unresolved Root_unresolved 110 5.99e-29   NR KAA6379614.1 222440 g17800 i0 57.8 1.65094339622642 90 38 84.9 0 3 272 4 93 KAA6379614.1 MAG: hypothetical protein EZS28_024857 [Streblomastix strix] diamond 525 111 0.990990990990991 Eukaryota Metamonada   Preaxostyla   Oxymonadida Streblomastigidae Streblomastix Streblomastix strix
30843814 30843814 PRJNA795983_S_NODE_12094_length_363_cov_1.710345_g11969_i0 PRJNA795983 12094 363 1.710345 6.20855235 Blattamonas nauphoetae 2049346 Preaxostyla other_Eukaryota 121 1.38e-32   NR KAK2959335.1 2049346 g11969 i0 52.7 1.81818181818182 110 52 90.9 0 337 8 1 110 KAK2959335.1 putative 60S ribosomal protein L21-A [Blattamonas nauphoetae] diamond 660 121 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida   Blattamonas Blattamonas nauphoetae

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;