RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA795983" and tax_phylum = "Nitrososphaerota"

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tax_superkingdom 1

tax_phylum 1

  • Nitrososphaerota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA795983 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
22894103 22894103 PRJNA795983_S_NODE_16338_length_328_cov_1.760784_g16213_i0 PRJNA795983 16338 328 1.760784 5.77537152 Nitrososphaeria 1643678 Archaea Archaea 139 2.3e-36   NR WP_337863902.1 1971748 g16213 i0 62.3 6.79573170731707 106 40 97 0 322 5 7 112 WP_337863902.1 IMP dehydrogenase [Nitrososphaera sp.] diamond 2229 140 0.992857142857143 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae Nitrososphaera Nitrososphaera sp.
32866430 32866430 PRJNA795983_S_NODE_37140_length_249_cov_0.875000_g37015_i0 PRJNA795983 37140 249 0.875 2.17875 Candidatus Caldarchaeum sp. 2972665 Archaea Archaea 73.9 3.56e-13   NR MEM2832785.1 2972665 g37015 i0 52.4 1.01204819277108 84 34 98.8 4 246 1 1 80 MEM2832785.1 chitobiase/beta-hexosaminidase C-terminal domain-containing protein [Candidatus Caldarchaeum sp.] diamond 252 73.9 1 Archaea   Thermoproteati Nitrososphaerota   Candidatus Caldarchaeales Candidatus Caldarchaeaceae Candidatus Caldarchaeum Candidatus Caldarchaeum sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;