RNAquarium Metadata Server
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contig_metadata

5 rows where bioproject = "PRJNA795983" and tax_phylum = "Foraminifera"

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tax_superkingdom 1

tax_phylum 1

  • Foraminifera · 5 ✖

tax_clade 1

bioproject 1

  • PRJNA795983 · 5 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
8433286 8433286 PRJNA795983_S_NODE_35447_length_252_cov_1.223464_g35322_i0 PRJNA795983 35447 252 1.223464 3.08312928 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 142 9.53e-41   NR ETO03070.1 46433 g35322 i0 78.3 2.96428571428571 83 18 98.8 0 2 250 72 154 ETO03070.1 hypothetical protein RFI_34341 [Reticulomyxa filosa] diamond 747 142 1 Eukaryota Sar   Foraminifera     Reticulomyxidae Reticulomyxa Reticulomyxa filosa
27527724 27527724 PRJNA795983_S_NODE_20903_length_303_cov_1.339130_g20778_i0 PRJNA795983 20903 303 1.33913 4.0575639 Reticulomyxa filosa 46433 SAR_Eukaryotes SAR_Eukaryotes 145 4.68e-39   NR ETO10231.1 46433 g20778 i0 63.7 2.01980198019802 102 35 99 1 302 3 21 122 ETO10231.1 hypothetical protein RFI_27149 [Reticulomyxa filosa] diamond 612 145 1 Eukaryota Sar   Foraminifera     Reticulomyxidae Reticulomyxa Reticulomyxa filosa
28633089 28633089 PRJNA795983_S_NODE_35287_length_252_cov_1.670391_g35162_i0 PRJNA795983 35287 252 1.670391 4.20938532 Reticulomyxa filosa 46433 SAR_Eukaryotes SAR_Eukaryotes 129 8.02e-33   NR ETO35216.1 46433 g35162 i0 71.6 0.964285714285714 81 21 96.4 1 9 251 147 225 ETO35216.1 coagulation factor 5/8 type domain-containing protein [Reticulomyxa filosa] diamond 243 129 1 Eukaryota Sar   Foraminifera     Reticulomyxidae Reticulomyxa Reticulomyxa filosa
31728833 31728833 PRJNA795983_S_NODE_12477_length_359_cov_1.059441_g12352_i0 PRJNA795983 12477 359 1.059441 3.80339319 Reticulomyxa filosa 46433 SAR_Eukaryotes SAR_Eukaryotes 46.2 0.00833   NR ETO33689.1 46433 g12352 i0 22.7 1.54596100278552 88 65 71 1 38 292 521 608 ETO33689.1 hypothetical protein RFI_03408, partial [Reticulomyxa filosa] diamond 555 46.2 1 Eukaryota Sar   Foraminifera     Reticulomyxidae Reticulomyxa Reticulomyxa filosa
32812553 32812553 PRJNA795983_S_NODE_14320_length_343_cov_1.140741_g14195_i0 PRJNA795983 14320 343 1.140741 3.91274163 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 89.7 7.28e-19   NR ETO22589.1 46433 g14195 i0 46.1 3.09620991253644 128 51 98 5 1 336 101 226 ETO22589.1 hypothetical protein RFI_14603 [Reticulomyxa filosa] diamond 1062 89.7 1 Eukaryota Sar   Foraminifera     Reticulomyxidae Reticulomyxa Reticulomyxa filosa

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;