RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA795983" and tax_phylum = "Cryptomycota"

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tax_superkingdom 1

tax_phylum 1

  • Cryptomycota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA795983 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29611357 29611357 PRJNA795983_S_NODE_43970_length_233_cov_2.731250_g43845_i0 PRJNA795983 43970 233 2.73125 6.3638125 Rozella allomycis CSF55 988480 Fungi Fungi 52 1.79e-5   NR EPZ32737.1 988480 g43845 i0 47.4 0.733905579399142 57 29 73.4 1 213 43 483 538 EPZ32737.1 DUF1929 domain-containing protein [Rozella allomycis CSF55] diamond 171 52 1 Eukaryota Opisthokonta Fungi Cryptomycota       Rozella Rozella allomycis
30275265 30275265 PRJNA795983_S_NODE_26872_length_278_cov_1.502439_g26747_i0 PRJNA795983 26872 278 1.502439 4.17678042 Rozella allomycis CSF55 988480 Fungi Fungi 79.3 7.67e-15   NR RKP21674.1 988480 g26747 i0 39.6 2.93525179856115 91 53 97.1 2 272 3 323 412 RKP21674.1 ubiquitinyl hydrolase [Rozella allomycis CSF55] diamond 816 79.3 1 Eukaryota Opisthokonta Fungi Cryptomycota       Rozella Rozella allomycis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;