RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

34 rows where bioproject = "PRJNA795983" and tax_phylum = "Apicomplexa"

✎ View and edit SQL

This data as json, CSV (advanced)

analysis 2

tax_superkingdom 1

tax_phylum 1

  • Apicomplexa · 34 ✖

tax_clade 1

bioproject 1

  • PRJNA795983 · 34 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
780194 780194 PRJNA795983_S_NODE_38721_length_247_cov_0.879310_g38596_i0 PRJNA795983 38721 247 0.87931 2.1718957 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 132 1.02e-34   NR XP_003881929.1 572307 g38596 i0 89.7 8.85425101214575 68 7 82.6 0 41 244 12 79 XP_003881929.1 S-adenosylmethionine synthetase,related [Neospora caninum Liverpool] diamond 2187 133 0.992481203007519 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Neospora Neospora caninum
3331128 3331128 PRJNA795983_S_NODE_18583_length_315_cov_1.272727_g18458_i0 PRJNA795983 18583 315 1.272727 4.00909005 Plasmodium inui 52288 SAR_Eukaryotes SAR_Eukaryotes 176 1.68e-39   NTclustered gi|672192570|ref|XM_008817645.1| 1237626 g18458 i0 80.508 34.2761904761905 236 40 74 6 34 266 166 398 Plasmodium inui San Antonio 1 40S ribosomal protein S11 partial mRNA blastn 10797 176 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium inui
5883521 5883521 PRJNA795983_S_NODE_14225_length_343_cov_2.488889_g14100_i0 PRJNA795983 14225 343 2.488889 8.53688927 Eucoccidiorida 75739 SAR_Eukaryotes SAR_Eukaryotes 150 4.77e-44   NR AAD52684.1 5811 g14100 i0 73.3 10.1545189504373 105 27 91 1 343 32 33 137 AAD52684.1 90kDa heat-shock protein, partial [Toxoplasma gondii] diamond 3483 151 0.993377483443709 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Toxoplasma Toxoplasma gondii
10144995 10144995 PRJNA795983_S_NODE_27508_length_276_cov_1.320197_g27383_i0 PRJNA795983 27508 276 1.320197 3.64374372 Piroplasmida 5863 SAR_Eukaryotes SAR_Eukaryotes 116 8.46e-29   NR XP_067804442.1 323732 g27383 i0 60 1.95652173913043 90 35 97.8 1 274 5 116 204 XP_067804442.1 bifunctional Ribosomal protein L3 [Babesia duncani] diamond 540 116 1 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Babesiidae Babesia Babesia duncani
12259579 12259579 PRJNA795983_S_NODE_24850_length_285_cov_4.344340_g24725_i0 PRJNA795983 24850 285 4.34434 12.381369 Babesia duncani 323732 SAR_Eukaryotes SAR_Eukaryotes 135 5.66e-38   NR XP_067804708.1 323732 g24725 i0 69.1 7.91578947368421 94 29 98.9 0 3 284 2 95 XP_067804708.1 bifunctional Ribosomal protein S8e/Ribosomal protein S8e [Babesia duncani] diamond 2256 135 1 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Babesiidae Babesia Babesia duncani
13533658 13533658 PRJNA795983_S_NODE_21211_length_301_cov_2.486842_g21086_i0 PRJNA795983 21211 301 2.486842 7.48539442 Plasmodium chabaudi 5825 SAR_Eukaryotes SAR_Eukaryotes 307 5.41e-79   NTclustered gi|1027950138|ref|XM_016797486.1| 31271 g21086 i0 85.235 203.598006644518 298 44 99 0 4 301 839 542 Plasmodium chabaudi chabaudi polyubiquitin (PCHAS_0612000), partial mRNA blastn 61283 307 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium chabaudi
16082816 16082816 PRJNA795983_S_NODE_7553_length_430_cov_2.347339_g7428_i0 PRJNA795983 7553 430 2.347339 10.0935577 Babesia sp. Xinjiang 462227 SAR_Eukaryotes SAR_Eukaryotes 148 1.13e-42   NR XP_028869867.1 462227 g7428 i0 53.9 6.73953488372093 141 62 96.3 1 417 4 4 144 XP_028869867.1 Eukaryotic translation initiation factor 5A [Babesia sp. Xinjiang] diamond 2898 148 1 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Babesiidae Babesia Babesia sp. Xinjiang
17358524 17358524 PRJNA795983_S_NODE_34894_length_253_cov_1.711111_g34769_i0 PRJNA795983 34894 253 1.711111 4.32911083 Plasmodium vinckei 5860 SAR_Eukaryotes SAR_Eukaryotes 54.7 0.006   NTclustered gi|669195911|ref|XM_008624745.1| 54757 g34769 i0 100 0.114624505928854 29 0 11 0 169 197 3017 3045 Plasmodium vinckei vinckei CCR4-associated factor 1, putative (PVVCY_1402810), partial mRNA blastn 29 54.7 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium vinckei
19906944 19906944 PRJNA795983_S_NODE_34196_length_255_cov_1.648352_g34071_i0 PRJNA795983 34196 255 1.648352 4.2032976 Besnoitia besnoiti 94643 SAR_Eukaryotes SAR_Eukaryotes 127 5.32e-32   NR XP_029219106.1 94643 g34071 i0 72.6 2.96470588235294 84 22 97.6 1 250 2 712 795 XP_029219106.1 aconitate hydratase ACN/IRP [Besnoitia besnoiti] diamond 756 127 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Besnoitia Besnoitia besnoiti
23733134 23733134 PRJNA795983_S_NODE_9859_length_390_cov_2.526814_g9734_i0 PRJNA795983 9859 390 2.526814 9.8545746 Plasmodium gallinaceum 5849 SAR_Eukaryotes SAR_Eukaryotes 339 2.5499999999999997e-88   NTclustered gi|1620122625|ref|XM_028672062.1| 5849 g9734 i0 83.379 85.3641025641026 367 59 94 2 25 390 16 381 Plasmodium gallinaceum calmodulin, putative (CAM), partial mRNA blastn 33292 339 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium gallinaceum
25443273 25443273 PRJNA795983_S_NODE_35780_length_251_cov_1.297753_g35655_i0 PRJNA795983 35780 251 1.297753 3.25736003 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 119 1.16e-30   NR OEH77157.1 88456 g35655 i0 74.7 3.63346613545817 75 19 89.6 0 249 25 223 297 OEH77157.1 60s ribosomal protein [Cyclospora cayetanensis] diamond 912 119 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Cyclospora Cyclospora cayetanensis
26927258 26927258 PRJNA795983_S_NODE_36062_length_251_cov_0.865169_g35937_i0 PRJNA795983 36062 251 0.865169 2.17157419 Hepatocystis sp. ex Piliocolobus tephrosceles 2600580 SAR_Eukaryotes SAR_Eukaryotes 50.8 1.25e-5   NR VWU48537.1 2600580 g35937 i0 40.4 1.36254980079681 57 33 66.9 1 171 4 53 109 VWU48537.1 hypothetical protein HEP_00046300, partial [Hepatocystis sp. ex Piliocolobus tephrosceles] diamond 342 50.8 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Hepatocystis Hepatocystis sp. ex Piliocolobus tephrosceles
27022232 27022232 PRJNA795983_S_NODE_38442_length_247_cov_1.172414_g38317_i0 PRJNA795983 38442 247 1.172414 2.89586258 Plasmodium reichenowi 5854 SAR_Eukaryotes SAR_Eukaryotes 115 1.25e-28   NR CDO63451.1 5854 g38317 i0 60.5 4.10526315789474 81 32 98.4 0 4 246 92 172 CDO63451.1 conserved protein, unknown function [Plasmodium reichenowi] diamond 1014 115 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium reichenowi
27591150 27591150 PRJNA795983_S_NODE_42264_length_242_cov_0.911243_g42139_i0 PRJNA795983 42264 242 0.911243 2.20520806 Plasmodium cynomolgi strain B 1120755 SAR_Eukaryotes SAR_Eukaryotes 74.3 2.71e-13   NR XP_004225382.1 1120755 g42139 i0 43.5 1.05371900826446 85 40 95.5 1 11 241 103 187 XP_004225382.1 asparagine - tRNA ligase [Plasmodium cynomolgi strain B] diamond 255 74.3 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium cynomolgi
27622672 27622672 PRJNA795983_S_NODE_26604_length_279_cov_1.495146_g26479_i0 PRJNA795983 26604 279 1.495146 4.17145734 Gregarina niphandrodes 110365 SAR_Eukaryotes SAR_Eukaryotes 122 8.749999999999999e-31   NR XP_011131158.1 110365 g26479 i0 62 2.94623655913978 92 35 98.9 0 277 2 159 250 XP_011131158.1 phosphoglycerate kinase [Gregarina niphandrodes] diamond 822 122 1 Eukaryota Sar   Apicomplexa Conoidasida Eugregarinorida Gregarinidae Gregarina Gregarina niphandrodes
28168456 28168456 PRJNA795983_S_NODE_29585_length_269_cov_1.438776_g29460_i0 PRJNA795983 29585 269 1.438776 3.87030744 Sarcocystidae 5809 SAR_Eukaryotes SAR_Eukaryotes 99 8.34e-22   NR XP_002366770.1 508771 g29460 i0 64.3 5.07434944237918 70 25 78.1 0 269 60 313 382 XP_002366770.1 calcium-dependent protein kinase CDPK2B [Toxoplasma gondii ME49] diamond 1365 99.4 0.995975855130785 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Toxoplasma Toxoplasma gondii
28168460 28168460 PRJNA795983_S_NODE_41045_length_243_cov_1.811765_g40920_i0 PRJNA795983 41045 243 1.811765 4.40258895 Eucoccidiorida 75739 SAR_Eukaryotes SAR_Eukaryotes 58.5 4.74e-8   NR XP_013234859.1 5802 g40920 i0 43.1 3.08641975308642 65 37 80.2 0 203 9 12 76 XP_013234859.1 SNARE protein, putative [Eimeria tenella] diamond 750 58.9 0.99320882852292 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria tenella
28294635 28294635 PRJNA795983_S_NODE_29406_length_269_cov_4.525510_g29281_i0 PRJNA795983 29406 269 4.52551 12.1736219 root 1 Root_unresolved Root_unresolved 88.6 9.05e-21   NR XP_067803900.1 323732 g29281 i0 56.7 1.6728624535316 67 29 74.7 0 41 241 9 75 XP_067803900.1 bifunctional Acyl-CoA-binding protein [Babesia duncani] diamond 450 89 0.995505617977528 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Babesiidae Babesia Babesia duncani
28768237 28768237 PRJNA795983_S_NODE_3727_length_562_cov_8.083845_g3606_i0 PRJNA795983 3727 562 8.083845 45.4312089 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 202 2.94e-62   NR OEH76901.1 88456 g3606 i0 61.6 4.63345195729537 177 68 94.5 0 6 536 29 205 OEH76901.1 ribosomal protein rpl19 [Cyclospora cayetanensis] diamond 2604 202 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Cyclospora Cyclospora cayetanensis
29674474 29674474 PRJNA795983_S_NODE_41550_length_243_cov_0.905882_g41425_i0 PRJNA795983 41550 243 0.905882 2.20129326 Toxoplasma gondii ME49 508771 SAR_Eukaryotes SAR_Eukaryotes 62.4 4.17e-9   NR XP_018635900.1 508771 g41425 i0 40.3 2.81481481481481 77 45 95.1 1 231 1 288 363 XP_018635900.1 proteasome subunit [Toxoplasma gondii ME49] diamond 684 62.4 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Toxoplasma Toxoplasma gondii
30148406 30148406 PRJNA795983_S_NODE_33612_length_257_cov_1.184783_g33487_i0 PRJNA795983 33612 257 1.184783 3.04489231 Cyclospora cayetanensis 88456 SAR_Eukaryotes SAR_Eukaryotes 48.5 4.2e-4   NR XP_026193943.1 88456 g33487 i0 31.3 0.747081712062257 64 43 73.5 1 195 7 1501 1564 XP_026193943.1 uncharacterized protein LOC34617699 [Cyclospora cayetanensis] diamond 192 48.5 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Cyclospora Cyclospora cayetanensis
30189298 30189298 PRJNA795983_S_NODE_42792_length_241_cov_1.357143_g42667_i0 PRJNA795983 42792 241 1.357143 3.27071463 Plasmodium 5820 SAR_Eukaryotes SAR_Eukaryotes 79.7 2.87e-15   NR XP_012765033.2 5854 g42667 i0 53.4 2.61410788381743 73 34 90.9 0 221 3 68 140 XP_012765033.2 U1 small nuclear ribonucleoprotein, putative [Plasmodium reichenowi] diamond 630 79.7 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium reichenowi
30243506 30243506 PRJNA795983_S_NODE_25432_length_283_cov_2.109524_g25307_i0 PRJNA795983 25432 283 2.109524 5.96995292 Eimeria praecox 51316 SAR_Eukaryotes SAR_Eukaryotes 57 2.5e-7   NR CDI79520.1 51316 g25307 i0 70.7 0.826855123674912 41 12 43.5 0 160 282 44 84 CDI79520.1 calmodulin, putative [Eimeria praecox] diamond 234 57 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria praecox
30275271 30275271 PRJNA795983_S_NODE_32372_length_260_cov_1.903743_g32247_i0 PRJNA795983 32372 260 1.903743 4.9497318 Cystoisospora suis 483139 SAR_Eukaryotes SAR_Eukaryotes 66.6 3.27e-11   NR XP_067918974.1 483139 g32247 i0 43.2 1.01538461538462 88 41 98.1 3 3 257 1 82 XP_067918974.1 60s ribosomal protein l18 [Cystoisospora suis] diamond 264 66.6 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Cystoisospora Cystoisospora suis
30536912 30536912 PRJNA795983_S_NODE_30153_length_267_cov_1.572165_g30028_i0 PRJNA795983 30153 267 1.572165 4.19768055 Apicomplexa 5794 SAR_Eukaryotes SAR_Eukaryotes 45.4 0.00575   NR XP_028541911.1 77519 g30028 i0 38.2 3.73033707865169 68 39 76.4 2 256 53 1023 1087 XP_028541911.1 cysteine repeat modular protein 2 [Plasmodium gonderi] diamond 996 45.4 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium gonderi
30568208 30568208 PRJNA795983_S_NODE_16253_length_329_cov_1.070312_g16128_i0 PRJNA795983 16253 329 1.070312 3.52132648 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 92.8 2.63e-20   NR XP_028865208.1 189622 g16128 i0 63.4 4.62310030395137 71 26 64.7 0 324 112 166 236 XP_028865208.1 translation initiation factor [Babesia ovata] diamond 1521 93.6 0.991452991452991 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Babesiidae Babesia Babesia ovata
30694834 30694834 PRJNA795983_S_NODE_35493_length_252_cov_0.905028_g35368_i0 PRJNA795983 35493 252 0.905028 2.28067056 Eucoccidiorida 75739 SAR_Eukaryotes SAR_Eukaryotes 65.9 1.71e-11   NR KAF7455860.1 83540 g35368 i0 67.3 4.35714285714286 49 16 58.3 0 149 3 26 74 KAF7455860.1 40S ribosomal protein S20 [Cryptosporidium felis] diamond 1098 66.2 0.995468277945619 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Cryptosporidiidae Cryptosporidium Cryptosporidium felis
30758137 30758137 PRJNA795983_S_NODE_26234_length_280_cov_2.053140_g26109_i0 PRJNA795983 26234 280 2.05314 5.748792 Piroplasmida 5863 SAR_Eukaryotes SAR_Eukaryotes 80.5 1.12e-16   NR XP_028870465.1 462227 g26109 i0 54.2 3.01071428571429 72 30 76.1 2 266 54 4 73 XP_028870465.1 Ubiquitin-conjugating enzyme E2 15 [Babesia sp. Xinjiang] diamond 843 81.3 0.990159901599016 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Babesiidae Babesia Babesia sp. Xinjiang
30758142 30758142 PRJNA795983_S_NODE_35894_length_251_cov_0.938202_g35769_i0 PRJNA795983 35894 251 0.938202 2.35488702 Vitrellaceae 2605696 SAR_Eukaryotes SAR_Eukaryotes 105 2.21e-26   NR KAF8820741.1 476202 g35769 i0 60.8 1.88844621513944 79 31 94.4 0 251 15 59 137 KAF8820741.1 slc30a2 protein [Cardiosporidium cionae] diamond 474 106 0.990566037735849 Eukaryota Sar   Apicomplexa Aconoidasida Nephromycida   Cardiosporidium Cardiosporidium cionae
30758145 30758145 PRJNA795983_S_NODE_42234_length_242_cov_0.911243_g42109_i0 PRJNA795983 42234 242 0.911243 2.20520806 root 1 Root_unresolved Root_unresolved 66.2 1.6e-10   NR XP_028536363.1 880535 g42109 i0 44.6 3.76859504132231 74 38 91.7 1 238 17 167 237 XP_028536363.1 protein kinase 7 [Plasmodium sp. gorilla clade G2] diamond 912 66.2 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium sp. gorilla clade G2
30812062 30812062 PRJNA795983_S_NODE_32774_length_259_cov_1.612903_g32649_i0 PRJNA795983 32774 259 1.612903 4.17741877 Babesia ovata 189622 SAR_Eukaryotes SAR_Eukaryotes 56.6 5.56e-7   NR XP_028867941.1 189622 g32649 i0 55.3 2.17760617760618 47 21 54.4 0 230 90 360 406 XP_028867941.1 FHA domain-containing protein [Babesia ovata] diamond 564 56.6 1 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Babesiidae Babesia Babesia ovata
31001778 31001778 PRJNA795983_S_NODE_6194_length_462_cov_2.717224_g6069_i0 PRJNA795983 6194 462 2.717224 12.55357488 Eimeria mitis 44415 SAR_Eukaryotes SAR_Eukaryotes 60.5 1.84e-7   NR XP_037878247.1 44415 g6069 i0 64.9 0.506493506493506 37 13 24 0 112 2 223 259 XP_037878247.1 sedoheptulose-1,7 bisphosphatase, putative [Eimeria mitis] diamond 234 60.5 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria mitis
31033583 31033583 PRJNA795983_S_NODE_40915_length_244_cov_0.871345_g40790_i0 PRJNA795983 40915 244 0.871345 2.1260818 Cyclospora cayetanensis 88456 SAR_Eukaryotes SAR_Eukaryotes 126 4.96e-32   NR OEH80096.1 88456 g40790 i0 78.8 2.96311475409836 80 17 98.4 0 241 2 73 152 OEH80096.1 2-phosphoglycerate dehydratase [Cyclospora cayetanensis] diamond 723 126 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Cyclospora Cyclospora cayetanensis
31168579 31168579 PRJNA795983_S_NODE_10575_length_381_cov_1.532468_g10450_i0 PRJNA795983 10575 381 1.532468 5.83870308 Sarcocystidae 5809 SAR_Eukaryotes SAR_Eukaryotes 196 2.1e-60   NR XP_003882352.1 572307 g10450 i0 70.1 2 127 38 100 0 381 1 81 207 XP_003882352.1 hypothetical protein NCLIV_021080 [Neospora caninum Liverpool] diamond 762 197 0.99492385786802 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Neospora Neospora caninum

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;