RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA795983", tax_kingdom = "Methanobacteriati" and tax_phylum = "Thermoplasmatota"

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tax_superkingdom 1

tax_phylum 1

  • Thermoplasmatota · 2 ✖

tax_kingdom 1

  • Methanobacteriati · 2 ✖

bioproject 1

  • PRJNA795983 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27284250 27284250 PRJNA795983_S_NODE_37363_length_249_cov_0.875000_g37238_i0 PRJNA795983 37363 249 0.875 2.17875 root 1 Root_unresolved Root_unresolved 114 8.46e-28   NR RLF37243.1 1906666 g37238 i0 66.7 2.90361445783133 81 27 97.6 0 6 248 307 387 RLF37243.1 MAG: L-lysine 6-transaminase [Thermoplasmata archaeon] diamond 723 114 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata       Thermoplasmata archaeon
31760532 31760532 PRJNA795983_S_NODE_39777_length_245_cov_1.127907_g39652_i0 PRJNA795983 39777 245 1.127907 2.76337215 Candidatus Poseidoniales archaeon 2163009 Archaea Archaea 48.1 4.66e-4   NR MFL2940038.1 2163009 g39652 i0 56.1 3.20816326530612 41 17 49 1 212 93 373 413 MFL2940038.1 purple acid phosphatase family protein [Candidatus Poseidoniales archaeon] diamond 786 48.1 1 Archaea   Methanobacteriati Thermoplasmatota Candidatus Poseidoniia Candidatus Poseidoniales     Candidatus Poseidoniales archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;