RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

8 rows where bioproject = "PRJNA795983", tax_kingdom = "Fungi" and tax_phylum = "Blastocladiomycota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Blastocladiomycota · 8 ✖

tax_kingdom 1

  • Fungi · 8 ✖

tax_clade 1

bioproject 1

  • PRJNA795983 · 8 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
8433316 8433316 PRJNA795983_S_NODE_38607_length_247_cov_0.885057_g38482_i0 PRJNA795983 38607 247 0.885057 2.18609079 Catenaria anguillulae PL171 765915 Fungi Fungi 111 4.16e-28   NR ORZ32611.1 765915 g38482 i0 65.9 2.96356275303644 82 28 99.6 0 246 1 111 192 ORZ32611.1 kinase-like domain-containing protein, partial [Catenaria anguillulae PL171] diamond 732 111 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Catenariaceae Catenaria Catenaria anguillulae
13533907 13533907 PRJNA795983_S_NODE_44411_length_229_cov_2.038462_g44286_i0 PRJNA795983 44411 229 2.038462 4.66807798 Blastocladiella emersonii ATCC 22665 1313167 Fungi Fungi 82.8 3.31e-17   NR KAI9182903.1 1313167 g44286 i0 60.9 1.67685589519651 69 23 85.2 1 2 196 167 235 KAI9182903.1 40S ribosomal protein S3 [Blastocladiella emersonii ATCC 22665] diamond 384 82.8 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Blastocladiaceae Blastocladiella Blastocladiella emersonii
18631773 18631773 PRJNA795983_S_NODE_5035_length_499_cov_6.866197_g4911_i0 PRJNA795983 5035 499 6.866197 34.26232303 Coelomomyces lativittatus 945690 Fungi Fungi 207 1.25e-65   NR KAJ1500207.1 945690 g4911 i0 67.1 17.9639278557114 149 49 89.6 0 25 471 4 152 KAJ1500207.1 nucleoside diphosphate kinase [Coelomomyces lativittatus] diamond 8964 207 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Coelomomycetaceae Coelomomyces Coelomomyces lativittatus
28799650 28799650 PRJNA795983_S_NODE_11887_length_365_cov_2.020548_g11762_i0 PRJNA795983 11887 365 2.020548 7.3750002 Eukaryota 2759 Fungi Fungi 160 7.769999999999999e-47   NR KAJ3372140.1 64504 g11762 i0 64.2 51.9123287671233 120 43 98.6 0 4 363 66 185 KAJ3372140.1 ribosomal 40S subunit protein S18B [Allomyces arbusculus] diamond 18948 160 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Blastocladiaceae Allomyces Allomyces arbusculus
29304974 29304974 PRJNA795983_S_NODE_26109_length_281_cov_1.283654_g25984_i0 PRJNA795983 26109 281 1.283654 3.60706774 Blastocladiomycota 451459 Fungi Fungi 98.2 1.9e-21   NR KAI9179662.1 1313167 g25984 i0 58.2 9.61921708185053 91 34 97.2 2 7 279 650 736 KAI9179662.1 Elongation factor G, mitochondrial [Blastocladiella emersonii ATCC 22665] diamond 2703 98.6 0.995943204868154 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Blastocladiaceae Blastocladiella Blastocladiella emersonii
30379293 30379293 PRJNA795983_S_NODE_13492_length_349_cov_7.862319_g13367_i0 PRJNA795983 13492 349 7.862319 27.43949331 Fungi 4751 Fungi Fungi 121 5.9999999999999997e-33   NR KAI9221418.1 64508 g13367 i0 59.8 5.00286532951289 97 39 83.4 0 327 37 14 110 KAI9221418.1 60S ribosomal protein L30 [Blastocladiella britannica] diamond 1746 122 0.991803278688525 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Blastocladiaceae Blastocladiella Blastocladiella britannica
31199970 31199970 PRJNA795983_S_NODE_27895_length_274_cov_4.582090_g27770_i0 PRJNA795983 27895 274 4.58209 12.5549266 Fungi 4751 Fungi Fungi 83.2 4.46e-18   NR ORZ39709.1 765915 g27770 i0 48.2 6.47080291970803 83 43 90.9 0 25 273 6 88 ORZ39709.1 ribosomal protein L14-domain-containing protein [Catenaria anguillulae PL171] diamond 1773 83.2 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Catenariaceae Catenaria Catenaria anguillulae
32203558 32203558 PRJNA795983_S_NODE_43838_length_235_cov_2.024691_g43713_i0 PRJNA795983 43838 235 2.024691 4.75802385 Paraphysoderma sedebokerense 1500003 Fungi Fungi 86.3 7.05e-20   NR KAI9137792.1 1500003 g43713 i0 65.7 0.85531914893617 67 23 85.5 0 201 1 4 70 KAI9137792.1 ribosomal protein L36e [Paraphysoderma sedebokerense] diamond 201 86.3 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Physodermatomycetes Physodermatales Physodermataceae Paraphysoderma Paraphysoderma sedebokerense

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;