RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA795983", tax_clade = "Metamonada" and tax_phylum = "Parabasalia"

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tax_superkingdom 1

tax_phylum 1

  • Parabasalia · 4 ✖

tax_clade 1

  • Metamonada · 4 ✖

bioproject 1

  • PRJNA795983 · 4 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26683008 26683008 PRJNA795983_S_NODE_12541_length_358_cov_1.666667_g12416_i0 PRJNA795983 12541 358 1.666667 5.96666786 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 43.5 0.0149   NR XP_001314726.1 412133 g12416 i0 42.2 1.05586592178771 45 22 37.7 1 149 15 51 91 XP_001314726.1 positive regulation of ATP-dependent microtubule motor activity, plus-end-directed [Trichomonas vaginalis G3] diamond 378 43.5 1 Eukaryota Metamonada   Parabasalia   Trichomonadida Trichomonadidae Trichomonas Trichomonas vaginalis
27947434 27947434 PRJNA795983_S_NODE_24565_length_287_cov_0.878505_g24440_i0 PRJNA795983 24565 287 0.878505 2.52130935 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 59.3 9.45e-8   NR XP_067778785.1 135588 g24440 i0 34.7 3.08362369337979 95 61 99.3 1 3 287 344 437 XP_067778785.1 protein phosphatase 2C [Histomonas meleagridis] diamond 885 59.7 0.993299832495812 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Dientamoebidae Histomonas Histomonas meleagridis
30370233 30370233 PRJNA795983_S_NODE_3652_length_566_cov_6.405680_g3531_i0 PRJNA795983 3652 566 6.40568 36.2561488 Tritrichomonas foetus 1144522 Parabasalia other_Eukaryota 199 2.12e-61   NR XP_068360038.1 1144522 g3531 i0 57.2 7.37809187279152 173 74 91.7 0 542 24 5 177 XP_068360038.1 40S ribosomal protein S9-1 [Tritrichomonas foetus] diamond 4176 199 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Tritrichomonadidae Tritrichomonas Tritrichomonas foetus
31855399 31855399 PRJNA795983_S_NODE_38617_length_247_cov_0.885057_g38492_i0 PRJNA795983 38617 247 0.885057 2.18609079 Tritrichomonas foetus 1144522 Parabasalia other_Eukaryota 63.5 1.76e-9   NR XP_068349855.1 1144522 g38492 i0 43.5 0.838056680161943 69 39 83.8 0 228 22 16 84 XP_068349855.1 CBL-interacting serine/threonine-protein kinase 11 [Tritrichomonas foetus] diamond 207 63.5 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Tritrichomonadidae Tritrichomonas Tritrichomonas foetus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;