RNAquarium Metadata Server
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contig_metadata

10 rows where bioproject = "PRJNA795983", tax_clade = "Metamonada" and tax_phylum = "Fornicata"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Fornicata · 10 ✖

tax_clade 1

  • Metamonada · 10 ✖

bioproject 1

  • PRJNA795983 · 10 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
13533802 13533802 PRJNA795983_S_NODE_34751_length_253_cov_6.250000_g34626_i0 PRJNA795983 34751 253 6.25 15.8125 Carpediemonas sp. NC 797131 Fornicata other_Eukaryota 276 1.2499999999999998e-69   NTclustered gi|339759391|dbj|AB600309.1| 797131 g34626 i0 87.243 98.9683794466403 243 29 96 2 12 253 5 246 Carpediemonas sp. NC gene for translation elongation factor 1 alpha, partial cds blastn 25039 276 1 Eukaryota Metamonada   Fornicata       Carpediemonas Carpediemonas sp. NC
27085498 27085498 PRJNA795983_S_NODE_22182_length_297_cov_1.299107_g22057_i0 PRJNA795983 22182 297 1.299107 3.85834779 Hexamita inflata 28002 Fornicata other_Eukaryota 45.8 0.00587   NR CAK8755281.1 28002 g22057 i0 34.2 0.767676767676768 76 45 74.7 2 76 297 395 467 CAK8755281.1 HINF_072566 [Hexamita inflata] diamond 228 45.8 1 Eukaryota Metamonada   Fornicata   Diplomonadida Hexamitidae Hexamita Hexamita inflata
29327390 29327390 PRJNA795983_S_NODE_16829_length_325_cov_1.376984_g16704_i0 PRJNA795983 16829 325 1.376984 4.475198 Giardia intestinalis 5741 Fornicata other_Eukaryota 48.1 0.00115   NR ESU40462.1 5741 g16704 i0 48.3 1.66153846153846 58 22 46.2 2 297 148 226 283 ESU40462.1 Variant-specific surface protein [Giardia intestinalis] diamond 540 48.1 1 Eukaryota Metamonada   Fornicata   Diplomonadida Hexamitidae Giardia Giardia duodenalis
30180119 30180119 PRJNA795983_S_NODE_8592_length_410_cov_3.397626_g8467_i0 PRJNA795983 8592 410 3.397626 13.9302666 Hexamita inflata 28002 Fornicata other_Eukaryota 136 9.9e-36   NR CAK8746233.1 28002 g8467 i0 50 1.87317073170732 128 64 93.7 0 26 409 3 130 CAK8746233.1 HINF_020048 [Hexamita inflata] diamond 768 136 1 Eukaryota Metamonada   Fornicata   Diplomonadida Hexamitidae Hexamita Hexamita inflata
30590873 30590873 PRJNA795983_S_NODE_33893_length_256_cov_1.442623_g33768_i0 PRJNA795983 33893 256 1.442623 3.69311488 Spironucleus salmonicida 348837 Fornicata other_Eukaryota 51.2 4.63e-5   NR XP_067766864.1 348837 g33768 i0 40.9 0.7734375 66 34 73.8 3 49 237 929 992 XP_067766864.1 Cysteine-rich membrane protein 2 [Spironucleus salmonicida] diamond 198 51.2 1 Eukaryota Metamonada   Fornicata   Diplomonadida Hexamitidae Spironucleus Spironucleus salmonicida
30875293 30875293 PRJNA795983_S_NODE_24654_length_286_cov_1.769953_g24529_i0 PRJNA795983 24654 286 1.769953 5.06206558 Giardia muris 5742 Fornicata other_Eukaryota 56.6 7.97e-7   NR TNJ26588.1 5742 g24529 i0 56.4 0.409090909090909 39 17 40.9 0 99 215 148 186 TNJ26588.1 pVSP [Giardia muris] diamond 117 56.6 1 Eukaryota Metamonada   Fornicata   Diplomonadida Hexamitidae Giardia Giardia muris
31168582 31168582 PRJNA795983_S_NODE_23195_length_292_cov_3.283105_g23070_i0 PRJNA795983 23195 292 3.283105 9.5866666 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 94 2.93e-20   NR CAK8746233.1 28002 g23070 i0 58.8 3.92465753424658 85 35 87.3 0 5 259 150 234 CAK8746233.1 HINF_020048 [Hexamita inflata] diamond 1146 94.4 0.995762711864407 Eukaryota Metamonada   Fornicata   Diplomonadida Hexamitidae Hexamita Hexamita inflata
32108571 32108571 PRJNA795983_S_NODE_15778_length_332_cov_1.297297_g15653_i0 PRJNA795983 15778 332 1.297297 4.30702604 Hexamita inflata 28002 Fornicata other_Eukaryota 104 1.9499999999999994e-23   NR CAK8776523.1 28002 g15653 i0 54.6 2.60240963855422 97 43 87.7 1 328 38 1210 1305 CAK8776523.1 HINF_030324 [Hexamita inflata] diamond 864 104 1 Eukaryota Metamonada   Fornicata   Diplomonadida Hexamitidae Hexamita Hexamita inflata
32740710 32740710 PRJNA795983_S_NODE_22900_length_294_cov_1.244344_g22775_i0 PRJNA795983 22900 294 1.244344 3.65837136 Giardia intestinalis 5741 Fornicata other_Eukaryota 59.7 6.83e-8   NR ESU40462.1 5741 g22775 i0 52.6 0.581632653061224 57 21 52 2 2 154 227 283 ESU40462.1 Variant-specific surface protein [Giardia intestinalis] diamond 171 59.7 1 Eukaryota Metamonada   Fornicata   Diplomonadida Hexamitidae Giardia Giardia duodenalis
32897840 32897840 PRJNA795983_S_NODE_8120_length_419_cov_2.361272_g7995_i0 PRJNA795983 8120 419 2.361272 9.89372968 Giardia muris 5742 Fornicata other_Eukaryota 55.1 1.19e-5   NR TNJ30320.1 5742 g7995 i0 47.4 1.40334128878282 57 27 40.8 2 3 173 36 89 TNJ30320.1 VSP protein [Giardia muris] diamond 588 55.1 1 Eukaryota Metamonada   Fornicata   Diplomonadida Hexamitidae Giardia Giardia muris

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;