RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

23 rows where bioproject = "PRJNA795663" and tax_phylum = "Heterolobosea"

✎ View and edit SQL

This data as json, CSV (advanced)

analysis 2

tax_superkingdom 1

tax_phylum 1

  • Heterolobosea · 23 ✖

tax_clade 1

bioproject 1

  • PRJNA795663 · 23 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4607658 4607658 PRJNA795663_S_NODE_1224_length_493_cov_4.298246_g1122_i0 PRJNA795663 1224 493 4.298246 21.19035278 Acrasis kona 1008807 Heterolobosea other_Eukaryota 218 4.27e-65   NR KAL0483822.1 1008807 g1122 i0 76.6 1.66734279918864 137 32 83.4 0 2 412 427 563 KAL0483822.1 isocitrate lyase AceA [Acrasis kona] diamond 822 218 1 Eukaryota Discoba   Heterolobosea     Acrasidae Acrasis Acrasis kona
5883009 5883009 PRJNA795663_S_NODE_4705_length_269_cov_1.965517_g4600_i0 PRJNA795663 4705 269 1.965517 5.28724073 Acrasis kona 1008807 Heterolobosea other_Eukaryota 130 7.83e-34   NR KAL0483328.1 1008807 g4600 i0 89.2 0.825278810408922 74 8 82.5 0 246 25 332 405 KAL0483328.1 26S proteasome subunit Rpt6 [Acrasis kona] diamond 222 130 1 Eukaryota Discoba   Heterolobosea     Acrasidae Acrasis Acrasis kona
7157847 7157847 PRJNA795663_S_NODE_5326_length_253_cov_1.898148_g5221_i0 PRJNA795663 5326 253 1.898148 4.80231444 Acrasis kona 1008807 Heterolobosea other_Eukaryota 139 3.5e-36   NR KAL0481875.1 1008807 g5221 i0 74 0.91304347826087 77 20 91.3 0 22 252 352 428 KAL0481875.1 DNA excision repair protein ERCC [Acrasis kona] diamond 231 139 1 Eukaryota Discoba   Heterolobosea     Acrasidae Acrasis Acrasis kona
9707476 9707476 PRJNA795663_S_NODE_10868_length_186_cov_20.255034_g10763_i0 PRJNA795663 10868 186 20.255034 37.67436324 Allovahlkampfia sp. 1874883 Heterolobosea other_Eukaryota 333 5.069999999999999e-87   NTclustered gi|2874368072|gb|PQ819796.1| 1874883 g10763 i0 98.925 99.0752688172043 186 2 100 0 1 186 2711 2896 Allovahlkampfia sp. strain BA small subunit ribosomal RNA gene, partial sequence blastn 18428 333 1 Eukaryota Discoba   Heterolobosea     Acrasidae Allovahlkampfia Allovahlkampfia sp.
9707519 9707519 PRJNA795663_S_NODE_1308_length_481_cov_9.135135_g1206_i0 PRJNA795663 1308 481 9.135135 43.93999935 Allovahlkampfia sp. PKD 2011a 1217110 Heterolobosea other_Eukaryota 889 0   NTclustered gi|399764157|gb|JQ271668.1| 1217110 g1206 i0 100 34.8773388773389 481 0 100 0 1 481 34 514 Allovahlkampfia sp. PKD 2011a strain 4165 18S ribosomal RNA gene, partial sequence blastn 16776 889 1 Eukaryota Discoba   Heterolobosea     Acrasidae Allovahlkampfia Allovahlkampfia sp. PKD 2011a
9707677 9707677 PRJNA795663_S_NODE_3768_length_297_cov_4.953846_g3663_i0 PRJNA795663 3768 297 4.953846 14.71292262 Allovahlkampfia sp. 1874883 Heterolobosea other_Eukaryota 503 6.34e-138   NTclustered gi|2651357779|gb|PP174295.1| 1874883 g3663 i0 99.281 49.9191919191919 278 2 94 0 20 297 2590 2867 Allovahlkampfia sp. isolate P10 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 14826 503 1 Eukaryota Discoba   Heterolobosea     Acrasidae Allovahlkampfia Allovahlkampfia sp.
10983248 10983248 PRJNA795663_S_NODE_13649_length_170_cov_2.759398_g13544_i0 PRJNA795663 13649 170 2.759398 4.6909766 Allovahlkampfia sp. 1874883 Heterolobosea other_Eukaryota 303 3.55e-78   NTclustered gi|2651357779|gb|PP174295.1| 1874883 g13544 i0 98.83 24.2941176470588 171 1 100 1 1 170 3147 2977 Allovahlkampfia sp. isolate P10 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 4130 303 1 Eukaryota Discoba   Heterolobosea     Acrasidae Allovahlkampfia Allovahlkampfia sp.
12696058 12696058 PRJNA795663_S_NODE_6150_length_237_cov_27.150000_g6045_i0 PRJNA795663 6150 237 27.15 64.3455 Naegleria 5761 Heterolobosea other_Eukaryota 148 2.6399999999999998e-31   NTclustered gi|2031946985|emb|OD958550.1| 5763 g6045 i0 79.724 31.0928270042194 217 34 92 5 1 217 3012 3218 Naegleria fowleri Karachi_NF001 strain blastn 7369 148 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria fowleri
17357664 17357664 PRJNA795663_S_NODE_13214_length_172_cov_12.792593_g13109_i0 PRJNA795663 13214 172 12.792593 22.00325996 Naegleria jadini 51636 Heterolobosea other_Eukaryota 230 6.21e-56   NTclustered gi|2438257170|gb|OP997288.1| 51636 g13109 i0 94.595 86.7209302325581 148 8 86 0 21 168 5176 5323 Naegleria jadini strain ITMAP400 plasmid CERE, complete sequence blastn 14916 230 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria jadini
21618540 21618540 PRJNA795663_S_NODE_4337_length_279_cov_49.553719_g4232_i0 PRJNA795663 4337 279 49.553719 138.25487601 Allovahlkampfia 1217108 Heterolobosea other_Eukaryota 449 7.799999999999999e-122   NTclustered gi|399764157|gb|JQ271668.1| 1217110 g4232 i0 100 78.9354838709677 243 0 87 0 21 263 1758 2000 Allovahlkampfia sp. PKD 2011a strain 4165 18S ribosomal RNA gene, partial sequence blastn 22023 449 1 Eukaryota Discoba   Heterolobosea     Acrasidae Allovahlkampfia Allovahlkampfia sp. PKD 2011a
22456576 22456576 PRJNA795663_S_NODE_278_length_905_cov_61.578341_g219_i0 PRJNA795663 278 905 61.578341 557.28398605 Allovahlkampfia sp. 1874883 Heterolobosea other_Eukaryota 1458 0   NTclustered gi|2651357779|gb|PP174295.1| 1874883 g219 i0 95.912 15.4585635359116 905 27 99 1 11 905 4378 3474 Allovahlkampfia sp. isolate P10 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 13990 1458 1 Eukaryota Discoba   Heterolobosea     Acrasidae Allovahlkampfia Allovahlkampfia sp.
22894017 22894017 PRJNA795663_S_NODE_4438_length_276_cov_44.790795_g4333_i0 PRJNA795663 4438 276 44.790795 123.6225942 Allovahlkampfia 1217108 Heterolobosea other_Eukaryota 468 2.13e-127   NTclustered gi|399764157|gb|JQ271668.1| 1217110 g4333 i0 100 65.9927536231884 253 0 92 0 24 276 1522 1774 Allovahlkampfia sp. PKD 2011a strain 4165 18S ribosomal RNA gene, partial sequence blastn 18214 468 1 Eukaryota Discoba   Heterolobosea     Acrasidae Allovahlkampfia Allovahlkampfia sp. PKD 2011a
27116791 27116791 PRJNA795663_S_NODE_13282_length_172_cov_1.918519_g13177_i0 PRJNA795663 13282 172 1.918519 3.29985268 Acrasis kona 1008807 Heterolobosea other_Eukaryota 48.9 8.7e-5   NR KAL0476461.1 1008807 g13177 i0 52 0.872093023255814 50 18 83.7 2 27 170 195 240 KAL0476461.1 SLC22A7 [Acrasis kona] diamond 150 48.9 1 Eukaryota Discoba   Heterolobosea     Acrasidae Acrasis Acrasis kona
27685968 27685968 PRJNA795663_S_NODE_8004_length_212_cov_1.925714_g7899_i0 PRJNA795663 8004 212 1.925714 4.08251368 Acrasis kona 1008807 Heterolobosea other_Eukaryota 109 2.24e-26   NR KAL0487669.1 1008807 g7899 i0 81 0.891509433962264 63 12 89.2 0 192 4 331 393 KAL0487669.1 solute carrier family 35 member [Acrasis kona] diamond 189 109 1 Eukaryota Discoba   Heterolobosea     Acrasidae Acrasis Acrasis kona
27780497 27780497 PRJNA795663_S_NODE_5464_length_250_cov_2.488263_g5359_i0 PRJNA795663 5464 250 2.488263 6.2206575 Acrasis kona 1008807 Heterolobosea other_Eukaryota 65.1 2.75e-10   NR KAL0484498.1 1008807 g5359 i0 44.7 0.912 76 41 90 1 226 2 130 205 KAL0484498.1 gamma-glutamyl cyclotransferase domain-containing protein [Acrasis kona] diamond 228 65.1 1 Eukaryota Discoba   Heterolobosea     Acrasidae Acrasis Acrasis kona
27875016 27875016 PRJNA795663_S_NODE_4445_length_276_cov_2.803347_g4340_i0 PRJNA795663 4445 276 2.803347 7.73723772 Acrasis kona 1008807 Heterolobosea other_Eukaryota 58.5 1.52e-7   NR KAL0476585.1 1008807 g4340 i0 50 0.5 46 19 50 1 261 124 244 285 KAL0476585.1 Tmprss12 [Acrasis kona] diamond 138 58.5 1 Eukaryota Discoba   Heterolobosea     Acrasidae Acrasis Acrasis kona
28317171 28317171 PRJNA795663_S_NODE_15706_length_161_cov_1.556452_g15601_i0 PRJNA795663 15706 161 1.556452 2.50588772 Acrasis kona 1008807 Heterolobosea other_Eukaryota 42.7 0.0124   NR KAL0484560.1 1008807 g15601 i0 50 0.708074534161491 38 19 70.8 0 154 41 877 914 KAL0484560.1 hypothetical protein AKO1_011618 [Acrasis kona] diamond 114 42.7 1 Eukaryota Discoba   Heterolobosea     Acrasidae Acrasis Acrasis kona
28633075 28633075 PRJNA795663_S_NODE_6107_length_238_cov_4.721393_g6002_i0 PRJNA795663 6107 238 4.721393 11.23691534 Naegleria fowleri 5763 Heterolobosea other_Eukaryota 68.6 2.23e-12   NR XP_044563306.1 5763 g6002 i0 47.2 1.80252100840336 72 37 90.8 1 236 21 82 152 XP_044563306.1 uncharacterized protein FDP41_002413 [Naegleria fowleri] diamond 429 68.6 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria fowleri
29012085 29012085 PRJNA795663_S_NODE_4088_length_286_cov_3.437751_g3983_i0 PRJNA795663 4088 286 3.437751 9.83196786 Acrasis kona 1008807 Heterolobosea other_Eukaryota 43.5 0.032   NR KAL0487856.1 1008807 g3983 i0 53.8 0.409090909090909 39 16 40.9 1 46 162 353 389 KAL0487856.1 S-adenosylmethionine decarboxylase [Acrasis kona] diamond 117 43.5 1 Eukaryota Discoba   Heterolobosea     Acrasidae Acrasis Acrasis kona
30685576 30685576 PRJNA795663_S_NODE_11993_length_179_cov_2.697183_g11888_i0 PRJNA795663 11993 179 2.697183 4.82795757 Acrasis kona 1008807 Heterolobosea other_Eukaryota 49.3 7.17e-5   NR KAL0476461.1 1008807 g11888 i0 49 0.82122905027933 49 24 82.1 1 1 147 238 285 KAL0476461.1 SLC22A7 [Acrasis kona] diamond 147 49.3 1 Eukaryota Discoba   Heterolobosea     Acrasidae Acrasis Acrasis kona
31381186 31381186 PRJNA795663_S_NODE_1876_length_409_cov_3.069892_g1771_i0 PRJNA795663 1876 409 3.069892 12.55585828 Acrasis kona 1008807 Heterolobosea other_Eukaryota 177 5.72e-54   NR KAL0483306.1 1008807 g1771 i0 68.3 0.902200488997555 123 36 90.2 1 389 21 55 174 KAL0483306.1 cathepsin H [Acrasis kona] diamond 369 177 1 Eukaryota Discoba   Heterolobosea     Acrasidae Acrasis Acrasis kona
31381187 31381187 PRJNA795663_S_NODE_2296_length_373_cov_3.166667_g2191_i0 PRJNA795663 2296 373 3.166667 11.81166791 Acrasis kona 1008807 Heterolobosea other_Eukaryota 169 2.53e-47   NR KAL0476660.1 1008807 g2191 i0 76.4 1.72117962466488 106 25 85.3 0 22 339 411 516 KAL0476660.1 HMG-CoA reductase [Acrasis kona] diamond 642 169 1 Eukaryota Discoba   Heterolobosea     Acrasidae Acrasis Acrasis kona
31728830 31728830 PRJNA795663_S_NODE_6617_length_230_cov_1.818653_g6512_i0 PRJNA795663 6617 230 1.818653 4.1829019 Naegleria lovaniensis 51637 Heterolobosea other_Eukaryota 92.8 6.55e-20   NR XP_044546210.1 51637 g6512 i0 62.9 1.78695652173913 70 25 91.3 1 224 15 403 471 XP_044546210.1 uncharacterized protein C9374_007586 [Naegleria lovaniensis] diamond 411 92.8 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria lovaniensis

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;