RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA795663", tax_kingdom = "Shotokuvirae" and tax_phylum = "Cossaviricota"

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tax_superkingdom 1

tax_phylum 1

  • Cossaviricota · 2 ✖

tax_kingdom 1

  • Shotokuvirae · 2 ✖

bioproject 1

  • PRJNA795663 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3768020 3768020 PRJNA795663_S_NODE_1563_length_445_cov_3.333333_g1458_i0 PRJNA795663 1563 445 3.333333 14.83333185 root 1 Root_unresolved Root_unresolved 579 1.5999999999999994e-160   NTclustered gi|332752|gb|J02288.1|PLY2CG 10636 g1458 i0 99.684 11.7101123595506 316 1 96 0 113 428 811 1126 Murine polyomavirus strain A2, complete genome blastn 5211 579 1 Viruses   Shotokuvirae Cossaviricota Papovaviricetes Sepolyvirales Polyomaviridae Alphapolyomavirus Alphapolyomavirus muris
21618551 21618551 PRJNA795663_S_NODE_5517_length_249_cov_2.325472_g5412_i0 PRJNA795663 5517 249 2.325472 5.79042528 root 1 Root_unresolved Root_unresolved 460 3.16e-125   NTclustered gi|332752|gb|J02288.1|PLY2CG 10636 g5412 i0 100 11.6907630522088 249 0 100 0 1 249 592 344 Murine polyomavirus strain A2, complete genome blastn 2911 460 1 Viruses   Shotokuvirae Cossaviricota Papovaviricetes Sepolyvirales Polyomaviridae Alphapolyomavirus Alphapolyomavirus muris

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;