RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

3 rows where bioproject = "PRJNA795663", tax_clade = "Sar" and tax_phylum = "Ciliophora"

✎ View and edit SQL

This data as json, CSV (advanced)

analysis 2

tax_superkingdom 1

tax_phylum 1

  • Ciliophora · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA795663 · 3 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
9707460 9707460 PRJNA795663_S_NODE_10208_length_191_cov_2.168831_g10103_i0 PRJNA795663 10208 191 2.168831 4.14246721 Chilodonella piscicola 1654720 SAR_Eukaryotes SAR_Eukaryotes 292 8.89e-75   NTclustered gi|1389430804|gb|MH341632.1| 1654720 g10103 i0 94.301 7.03141361256545 193 7 100 3 1 191 353 163 Chilodonella piscicola strain SC large subunit ribosomal RNA gene, partial sequence blastn 1343 292 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella piscicola
11420285 11420285 PRJNA795663_S_NODE_5889_length_242_cov_5.048780_g5784_i0 PRJNA795663 5889 242 5.04878 12.2180476 Vorticella 60849 SAR_Eukaryotes SAR_Eukaryotes 388 1.46e-103   NTclustered gi|363412153|gb|JN120227.1| 60850 g5784 i0 100 86.7768595041322 210 0 87 0 19 228 1258 1467 Vorticella convallaria isolate 96Vorsp16 18S ribosomal RNA gene, partial sequence blastn 21000 388 1 Eukaryota Sar   Ciliophora Oligohymenophorea Sessilida Vorticellidae Vorticella Vorticella convallaria
28853679 28853679 PRJNA795663_S_NODE_11228_length_184_cov_2.006803_g11123_i0 PRJNA795663 11228 184 2.006803 3.69251752 Blepharisma stoltei 1481888 SAR_Eukaryotes SAR_Eukaryotes 91.3 2.7100000000000004e-21   NR CAG9318382.1 1481888 g11123 i0 60.7 0.994565217391304 61 24 99.5 0 183 1 65 125 CAG9318382.1 unnamed protein product [Blepharisma stoltei] diamond 183 91.3 1 Eukaryota Sar   Ciliophora Heterotrichea Heterotrichida Blepharismidae Blepharisma Blepharisma stoltei

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;