RNAquarium Metadata Server
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contig_metadata

12 rows where bioproject = "PRJNA795663", tax_clade = "Sar" and tax_phylum = "Cercozoa"

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tax_superkingdom 1

tax_phylum 1

  • Cercozoa · 12 ✖

tax_clade 1

  • Sar · 12 ✖

bioproject 1

  • PRJNA795663 · 12 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
779305 779305 PRJNA795663_S_NODE_1481_length_455_cov_24.918660_g1376_i0 PRJNA795663 1481 455 24.91866 113.379903 Paracercomonas marina 372086 SAR_Eukaryotes SAR_Eukaryotes 752 0   NTclustered gi|88792583|gb|DQ386164.1| 372086 g1376 i0 96.696 99.9626373626374 454 12 99 3 1 452 1951 1499 Paracercomonas marina 28S ribosomal RNA gene, partial sequence blastn 45483 752 1 Eukaryota Sar   Cercozoa   Cercomonadida Cercomonadidae Paracercomonas Paracercomonas marina
4607613 4607613 PRJNA795663_S_NODE_10164_length_191_cov_49.012987_g10059_i0 PRJNA795663 10164 191 49.012987 93.61480517 Paracercomonas crassicauda 466266 SAR_Eukaryotes SAR_Eukaryotes 327 2.44e-85   NTclustered gi|262262832|gb|FJ790725.1| 466266 g10059 i0 98.907 96.261780104712 183 2 96 0 9 191 1275 1457 Paracercomonas crassicauda strain ATCC 50316 18S ribosomal RNA gene, partial sequence blastn 18386 327 1 Eukaryota Sar   Cercozoa   Cercomonadida Cercomonadidae Paracercomonas Paracercomonas crassicauda
5882887 5882887 PRJNA795663_S_NODE_15085_length_163_cov_15.365079_g14980_i0 PRJNA795663 15085 163 15.365079 25.04507877 Paracercomonas marina 372086 SAR_Eukaryotes SAR_Eukaryotes 296 5.68e-76   NTclustered gi|88792583|gb|DQ386164.1| 372086 g14980 i0 99.387 100.478527607362 163 1 100 0 1 163 1532 1370 Paracercomonas marina 28S ribosomal RNA gene, partial sequence blastn 16378 296 1 Eukaryota Sar   Cercozoa   Cercomonadida Cercomonadidae Paracercomonas Paracercomonas marina
9707772 9707772 PRJNA795663_S_NODE_8788_length_203_cov_7.524096_g8683_i0 PRJNA795663 8788 203 7.524096 15.27391488 Paracercomonas marina 372086 SAR_Eukaryotes SAR_Eukaryotes 326 9.44e-85   NTclustered gi|88792583|gb|DQ386164.1| 372086 g8683 i0 98.378 91.1625615763547 185 3 91 0 1 185 1393 1209 Paracercomonas marina 28S ribosomal RNA gene, partial sequence blastn 18506 326 1 Eukaryota Sar   Cercozoa   Cercomonadida Cercomonadidae Paracercomonas Paracercomonas marina
10144797 10144797 PRJNA795663_S_NODE_12328_length_177_cov_13.278571_g12223_i0 PRJNA795663 12328 177 13.278571 23.50307067 Cercomonadidae 45108 SAR_Eukaryotes SAR_Eukaryotes 324 2.87e-84   NTclustered gi|1695780|gb|U42448.1|CAU42448 45110 g12223 i0 99.435 98.4519774011299 177 1 100 0 1 177 606 782 Cercomonas ATCC50316 18S ribosomal RNA gene, complete sequence blastn 17426 327 0.990825688073395 Eukaryota Sar   Cercozoa   Cercomonadida Cercomonadidae Cercomonas Cercomonas sp. ATCC 50316
11420304 11420304 PRJNA795663_S_NODE_7709_length_215_cov_3.022472_g7604_i0 PRJNA795663 7709 215 3.022472 6.4983148 Cercomonadidae 45108 SAR_Eukaryotes SAR_Eukaryotes 361 2.7699999999999993e-95   NTclustered gi|88792583|gb|DQ386164.1| 372086 g7604 i0 100 91.3209302325581 195 0 91 0 21 215 1021 1215 Paracercomonas marina 28S ribosomal RNA gene, partial sequence blastn 19634 361 1 Eukaryota Sar   Cercozoa   Cercomonadida Cercomonadidae Paracercomonas Paracercomonas marina
13532907 13532907 PRJNA795663_S_NODE_1211_length_494_cov_161.916849_g1109_i0 PRJNA795663 1211 494 161.916849 799.86923406 Cercomonas sp. HFCC540 458868 SAR_Eukaryotes SAR_Eukaryotes 440 8.809999999999997e-119   NTclustered gi|161015708|gb|EF681942.1| 458868 g1109 i0 84.479 36.4251012145749 451 65 91 5 26 474 686 239 Cercomonas sp. HFCC540 28S ribosomal RNA gene, partial sequence blastn 17994 440 1 Eukaryota Sar   Cercozoa   Cercomonadida Cercomonadidae Cercomonas Cercomonas sp. HFCC540
16081914 16081914 PRJNA795663_S_NODE_2573_length_353_cov_14.348101_g2468_i0 PRJNA795663 2573 353 14.348101 50.64879653 Paracercomonas crassicauda 466266 SAR_Eukaryotes SAR_Eukaryotes 652 0   NTclustered gi|262262832|gb|FJ790725.1| 466266 g2468 i0 100 98.3512747875354 353 0 100 0 1 353 384 32 Paracercomonas crassicauda strain ATCC 50316 18S ribosomal RNA gene, partial sequence blastn 34718 652 1 Eukaryota Sar   Cercozoa   Cercomonadida Cercomonadidae Paracercomonas Paracercomonas crassicauda
22456725 22456725 PRJNA795663_S_NODE_9438_length_197_cov_4.518750_g9333_i0 PRJNA795663 9438 197 4.51875 8.9019375 Paracercomonas marina 372086 SAR_Eukaryotes SAR_Eukaryotes 309 9.17e-80   NTclustered gi|88792583|gb|DQ386164.1| 372086 g9333 i0 94.949 170.091370558376 198 9 100 1 1 197 2506 2703 Paracercomonas marina 28S ribosomal RNA gene, partial sequence blastn 33508 309 1 Eukaryota Sar   Cercozoa   Cercomonadida Cercomonadidae Paracercomonas Paracercomonas marina
22894015 22894015 PRJNA795663_S_NODE_4338_length_279_cov_29.479339_g4233_i0 PRJNA795663 4338 279 29.479339 82.24735581 Paracercomonas 372085 SAR_Eukaryotes SAR_Eukaryotes 468 2.15e-127   NTclustered gi|262262832|gb|FJ790725.1| 466266 g4233 i0 99.609 91.7956989247312 256 1 92 0 24 279 752 1007 Paracercomonas crassicauda strain ATCC 50316 18S ribosomal RNA gene, partial sequence blastn 25611 468 1 Eukaryota Sar   Cercozoa   Cercomonadida Cercomonadidae Paracercomonas Paracercomonas crassicauda
23732118 23732118 PRJNA795663_S_NODE_13039_length_173_cov_4.823529_g12934_i0 PRJNA795663 13039 173 4.823529 8.34470517 Paracercomonas marina 372086 SAR_Eukaryotes SAR_Eukaryotes 320 3.61e-83   NTclustered gi|88792583|gb|DQ386164.1| 372086 g12934 i0 100 100.768786127168 173 0 100 0 1 173 2725 2897 Paracercomonas marina 28S ribosomal RNA gene, partial sequence blastn 17433 320 1 Eukaryota Sar   Cercozoa   Cercomonadida Cercomonadidae Paracercomonas Paracercomonas marina
25005859 25005859 PRJNA795663_S_NODE_4020_length_288_cov_32.661355_g3915_i0 PRJNA795663 4020 288 32.661355 94.0647024 Paracercomonas marina 372086 SAR_Eukaryotes SAR_Eukaryotes 375 1.3899999999999998e-99   NTclustered gi|88792583|gb|DQ386164.1| 372086 g3915 i0 92.135 55.2326388888889 267 19 92 2 24 288 1953 2219 Paracercomonas marina 28S ribosomal RNA gene, partial sequence blastn 15907 375 1 Eukaryota Sar   Cercozoa   Cercomonadida Cercomonadidae Paracercomonas Paracercomonas marina

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;