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contig_metadata

20 rows where bioproject = "PRJNA795663" and tax_clade = "Sar"

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tax_phylum 4

analysis 2

tax_superkingdom 1

tax_clade 1

  • Sar · 20 ✖

bioproject 1

  • PRJNA795663 · 20 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
779305 779305 PRJNA795663_S_NODE_1481_length_455_cov_24.918660_g1376_i0 PRJNA795663 1481 455 24.91866 113.379903 Paracercomonas marina 372086 SAR_Eukaryotes SAR_Eukaryotes 752 0   NTclustered gi|88792583|gb|DQ386164.1| 372086 g1376 i0 96.696 99.9626373626374 454 12 99 3 1 452 1951 1499 Paracercomonas marina 28S ribosomal RNA gene, partial sequence blastn 45483 752 1 Eukaryota Sar   Cercozoa   Cercomonadida Cercomonadidae Paracercomonas Paracercomonas marina
4607613 4607613 PRJNA795663_S_NODE_10164_length_191_cov_49.012987_g10059_i0 PRJNA795663 10164 191 49.012987 93.61480517 Paracercomonas crassicauda 466266 SAR_Eukaryotes SAR_Eukaryotes 327 2.44e-85   NTclustered gi|262262832|gb|FJ790725.1| 466266 g10059 i0 98.907 96.261780104712 183 2 96 0 9 191 1275 1457 Paracercomonas crassicauda strain ATCC 50316 18S ribosomal RNA gene, partial sequence blastn 18386 327 1 Eukaryota Sar   Cercozoa   Cercomonadida Cercomonadidae Paracercomonas Paracercomonas crassicauda
5882887 5882887 PRJNA795663_S_NODE_15085_length_163_cov_15.365079_g14980_i0 PRJNA795663 15085 163 15.365079 25.04507877 Paracercomonas marina 372086 SAR_Eukaryotes SAR_Eukaryotes 296 5.68e-76   NTclustered gi|88792583|gb|DQ386164.1| 372086 g14980 i0 99.387 100.478527607362 163 1 100 0 1 163 1532 1370 Paracercomonas marina 28S ribosomal RNA gene, partial sequence blastn 16378 296 1 Eukaryota Sar   Cercozoa   Cercomonadida Cercomonadidae Paracercomonas Paracercomonas marina
7157902 7157902 PRJNA795663_S_NODE_806_length_588_cov_9.226860_g717_i0 PRJNA795663 806 588 9.22686 54.2539368 Labyrinthula diatomea 2590897 SAR_Eukaryotes SAR_Eukaryotes 124 1.2099999999999999e-23   NTclustered gi|1693864506|gb|MN101174.1| 2590897 g717 i0 84.375 0.518707482993197 128 18 22 2 214 341 3731 3856 Labyrinthula diatomea strain Thailand-2017 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 305 124 1 Eukaryota Sar     Bigyra Labyrinthulida Labyrinthulaceae Labyrinthula Labyrinthula diatomea
9707460 9707460 PRJNA795663_S_NODE_10208_length_191_cov_2.168831_g10103_i0 PRJNA795663 10208 191 2.168831 4.14246721 Chilodonella piscicola 1654720 SAR_Eukaryotes SAR_Eukaryotes 292 8.89e-75   NTclustered gi|1389430804|gb|MH341632.1| 1654720 g10103 i0 94.301 7.03141361256545 193 7 100 3 1 191 353 163 Chilodonella piscicola strain SC large subunit ribosomal RNA gene, partial sequence blastn 1343 292 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella piscicola
9707772 9707772 PRJNA795663_S_NODE_8788_length_203_cov_7.524096_g8683_i0 PRJNA795663 8788 203 7.524096 15.27391488 Paracercomonas marina 372086 SAR_Eukaryotes SAR_Eukaryotes 326 9.44e-85   NTclustered gi|88792583|gb|DQ386164.1| 372086 g8683 i0 98.378 91.1625615763547 185 3 91 0 1 185 1393 1209 Paracercomonas marina 28S ribosomal RNA gene, partial sequence blastn 18506 326 1 Eukaryota Sar   Cercozoa   Cercomonadida Cercomonadidae Paracercomonas Paracercomonas marina
10144797 10144797 PRJNA795663_S_NODE_12328_length_177_cov_13.278571_g12223_i0 PRJNA795663 12328 177 13.278571 23.50307067 Cercomonadidae 45108 SAR_Eukaryotes SAR_Eukaryotes 324 2.87e-84   NTclustered gi|1695780|gb|U42448.1|CAU42448 45110 g12223 i0 99.435 98.4519774011299 177 1 100 0 1 177 606 782 Cercomonas ATCC50316 18S ribosomal RNA gene, complete sequence blastn 17426 327 0.990825688073395 Eukaryota Sar   Cercozoa   Cercomonadida Cercomonadidae Cercomonas Cercomonas sp. ATCC 50316
11420285 11420285 PRJNA795663_S_NODE_5889_length_242_cov_5.048780_g5784_i0 PRJNA795663 5889 242 5.04878 12.2180476 Vorticella 60849 SAR_Eukaryotes SAR_Eukaryotes 388 1.46e-103   NTclustered gi|363412153|gb|JN120227.1| 60850 g5784 i0 100 86.7768595041322 210 0 87 0 19 228 1258 1467 Vorticella convallaria isolate 96Vorsp16 18S ribosomal RNA gene, partial sequence blastn 21000 388 1 Eukaryota Sar   Ciliophora Oligohymenophorea Sessilida Vorticellidae Vorticella Vorticella convallaria
11420304 11420304 PRJNA795663_S_NODE_7709_length_215_cov_3.022472_g7604_i0 PRJNA795663 7709 215 3.022472 6.4983148 Cercomonadidae 45108 SAR_Eukaryotes SAR_Eukaryotes 361 2.7699999999999993e-95   NTclustered gi|88792583|gb|DQ386164.1| 372086 g7604 i0 100 91.3209302325581 195 0 91 0 21 215 1021 1215 Paracercomonas marina 28S ribosomal RNA gene, partial sequence blastn 19634 361 1 Eukaryota Sar   Cercozoa   Cercomonadida Cercomonadidae Paracercomonas Paracercomonas marina
12258913 12258913 PRJNA795663_S_NODE_18630_length_151_cov_1.535088_g18525_i0 PRJNA795663 18630 151 1.535088 2.31798288 Neospora caninum 29176 SAR_Eukaryotes SAR_Eukaryotes 106 9.33e-19   NTclustered gi|820691464|tpe|LN714483.1| 572307 g18525 i0 81.295 3.16556291390728 139 18 89 5 1 135 5011708 5011842 TPA_asm: Neospora caninum Liverpool, chromosome chrVIII, complete genome blastn 478 106 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Neospora Neospora caninum
13532907 13532907 PRJNA795663_S_NODE_1211_length_494_cov_161.916849_g1109_i0 PRJNA795663 1211 494 161.916849 799.86923406 Cercomonas sp. HFCC540 458868 SAR_Eukaryotes SAR_Eukaryotes 440 8.809999999999997e-119   NTclustered gi|161015708|gb|EF681942.1| 458868 g1109 i0 84.479 36.4251012145749 451 65 91 5 26 474 686 239 Cercomonas sp. HFCC540 28S ribosomal RNA gene, partial sequence blastn 17994 440 1 Eukaryota Sar   Cercozoa   Cercomonadida Cercomonadidae Cercomonas Cercomonas sp. HFCC540
16081914 16081914 PRJNA795663_S_NODE_2573_length_353_cov_14.348101_g2468_i0 PRJNA795663 2573 353 14.348101 50.64879653 Paracercomonas crassicauda 466266 SAR_Eukaryotes SAR_Eukaryotes 652 0   NTclustered gi|262262832|gb|FJ790725.1| 466266 g2468 i0 100 98.3512747875354 353 0 100 0 1 353 384 32 Paracercomonas crassicauda strain ATCC 50316 18S ribosomal RNA gene, partial sequence blastn 34718 652 1 Eukaryota Sar   Cercozoa   Cercomonadida Cercomonadidae Paracercomonas Paracercomonas crassicauda
22456725 22456725 PRJNA795663_S_NODE_9438_length_197_cov_4.518750_g9333_i0 PRJNA795663 9438 197 4.51875 8.9019375 Paracercomonas marina 372086 SAR_Eukaryotes SAR_Eukaryotes 309 9.17e-80   NTclustered gi|88792583|gb|DQ386164.1| 372086 g9333 i0 94.949 170.091370558376 198 9 100 1 1 197 2506 2703 Paracercomonas marina 28S ribosomal RNA gene, partial sequence blastn 33508 309 1 Eukaryota Sar   Cercozoa   Cercomonadida Cercomonadidae Paracercomonas Paracercomonas marina
22894015 22894015 PRJNA795663_S_NODE_4338_length_279_cov_29.479339_g4233_i0 PRJNA795663 4338 279 29.479339 82.24735581 Paracercomonas 372085 SAR_Eukaryotes SAR_Eukaryotes 468 2.15e-127   NTclustered gi|262262832|gb|FJ790725.1| 466266 g4233 i0 99.609 91.7956989247312 256 1 92 0 24 279 752 1007 Paracercomonas crassicauda strain ATCC 50316 18S ribosomal RNA gene, partial sequence blastn 25611 468 1 Eukaryota Sar   Cercozoa   Cercomonadida Cercomonadidae Paracercomonas Paracercomonas crassicauda
23732118 23732118 PRJNA795663_S_NODE_13039_length_173_cov_4.823529_g12934_i0 PRJNA795663 13039 173 4.823529 8.34470517 Paracercomonas marina 372086 SAR_Eukaryotes SAR_Eukaryotes 320 3.61e-83   NTclustered gi|88792583|gb|DQ386164.1| 372086 g12934 i0 100 100.768786127168 173 0 100 0 1 173 2725 2897 Paracercomonas marina 28S ribosomal RNA gene, partial sequence blastn 17433 320 1 Eukaryota Sar   Cercozoa   Cercomonadida Cercomonadidae Paracercomonas Paracercomonas marina
25005859 25005859 PRJNA795663_S_NODE_4020_length_288_cov_32.661355_g3915_i0 PRJNA795663 4020 288 32.661355 94.0647024 Paracercomonas marina 372086 SAR_Eukaryotes SAR_Eukaryotes 375 1.3899999999999998e-99   NTclustered gi|88792583|gb|DQ386164.1| 372086 g3915 i0 92.135 55.2326388888889 267 19 92 2 24 288 1953 2219 Paracercomonas marina 28S ribosomal RNA gene, partial sequence blastn 15907 375 1 Eukaryota Sar   Cercozoa   Cercomonadida Cercomonadidae Paracercomonas Paracercomonas marina
28348676 28348676 PRJNA795663_S_NODE_6466_length_232_cov_2.446154_g6361_i0 PRJNA795663 6466 232 2.446154 5.67507728 Plasmodiophora brassicae 37360 SAR_Eukaryotes SAR_Eukaryotes 55.1 7.7e-7   NR CEP01997.1 37360 g6361 i0 50 0.931034482758621 72 36 93.1 0 2 217 132 203 CEP01997.1 hypothetical protein PBRA_002262 [Plasmodiophora brassicae] diamond 216 55.1 1 Eukaryota Sar   Endomyxa Phytomyxea Plasmodiophorida Plasmodiophoridae Plasmodiophora Plasmodiophora brassicae
28569648 28569648 PRJNA795663_S_NODE_8587_length_206_cov_1.449704_g8482_i0 PRJNA795663 8587 206 1.449704 2.98639024 Plasmodiophora brassicae 37360 SAR_Eukaryotes SAR_Eukaryotes 78.6 5.37e-15   NR CEO96163.1 37360 g8482 i0 71.4 1.48543689320388 49 14 71.4 0 204 58 206 254 CEO96163.1 hypothetical protein PBRA_004853 [Plasmodiophora brassicae] diamond 306 78.6 1 Eukaryota Sar   Endomyxa Phytomyxea Plasmodiophorida Plasmodiophoridae Plasmodiophora Plasmodiophora brassicae
28853679 28853679 PRJNA795663_S_NODE_11228_length_184_cov_2.006803_g11123_i0 PRJNA795663 11228 184 2.006803 3.69251752 Blepharisma stoltei 1481888 SAR_Eukaryotes SAR_Eukaryotes 91.3 2.7100000000000004e-21   NR CAG9318382.1 1481888 g11123 i0 60.7 0.994565217391304 61 24 99.5 0 183 1 65 125 CAG9318382.1 unnamed protein product [Blepharisma stoltei] diamond 183 91.3 1 Eukaryota Sar   Ciliophora Heterotrichea Heterotrichida Blepharismidae Blepharisma Blepharisma stoltei
32235480 32235480 PRJNA795663_S_NODE_13838_length_169_cov_2.015152_g13733_i0 PRJNA795663 13838 169 2.015152 3.40560688 Plasmodiophora brassicae 37360 SAR_Eukaryotes SAR_Eukaryotes 79 2.77e-16   NR CEP01997.1 37360 g13733 i0 64.3 4.91715976331361 56 20 99.4 0 168 1 13 68 CEP01997.1 hypothetical protein PBRA_002262 [Plasmodiophora brassicae] diamond 831 79 1 Eukaryota Sar   Endomyxa Phytomyxea Plasmodiophorida Plasmodiophoridae Plasmodiophora Plasmodiophora brassicae

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;