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contig_metadata

32 rows where bioproject = "PRJNA795663" and tax_clade = "Amoebozoa"

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tax_phylum 2

analysis 2

tax_superkingdom 1

tax_clade 1

  • Amoebozoa · 32 ✖

bioproject 1

  • PRJNA795663 · 32 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
779284 779284 PRJNA795663_S_NODE_13621_length_170_cov_10.390977_g13516_i0 PRJNA795663 13621 170 10.390977 17.6646609 Soliformovum expulsum 435423 Evosea other_Eukaryota 243 7.859999999999999e-60   NTclustered gi|260909293|gb|FJ766479.1| 435423 g13516 i0 92.353 103.164705882353 170 13 100 0 1 170 561 392 Soliformovum expulsum culture-collection ATCC:48083 clone pool B 18S ribosomal RNA gene, partial sequence blastn 17538 243 1 Eukaryota Amoebozoa   Evosea Variosea Fractovitellida Soliformoviidae Soliformovum Soliformovum expulsum
3330419 3330419 PRJNA795663_S_NODE_1303_length_482_cov_3.388764_g1201_i0 PRJNA795663 1303 482 3.388764 16.33384248 Echinostelium bisporum 1973072 Evosea other_Eukaryota 614 4.779999999999999e-171   NTclustered gi|1465309735|gb|MH809395.1| 1973072 g1201 i0 89.754 60.8858921161826 488 39 100 10 1 482 581 99 Echinostelium bisporum isolate Nx14-A1 small subunit ribosomal RNA gene, partial sequence blastn 29347 614 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Echinosteliales Echinosteliidae Echinostelium Echinostelium bisporum
4607788 4607788 PRJNA795663_S_NODE_1924_length_403_cov_15.825137_g1819_i0 PRJNA795663 1924 403 15.825137 63.77530211 Echinostelium bisporum 1973072 Evosea other_Eukaryota 579 1.43e-160   NTclustered gi|1465309735|gb|MH809395.1| 1973072 g1819 i0 92.84 34.7717121588089 405 20 100 7 1 403 1712 1315 Echinostelium bisporum isolate Nx14-A1 small subunit ribosomal RNA gene, partial sequence blastn 14013 579 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Echinosteliales Echinosteliidae Echinostelium Echinostelium bisporum
8432364 8432364 PRJNA795663_S_NODE_11047_length_185_cov_2.925676_g10942_i0 PRJNA795663 11047 185 2.925676 5.4125006 Physarum polycephalum 5791 Evosea other_Eukaryota 193 8.919999999999999e-45   NTclustered gi|175957|gb|M19232.1|SLMRRMPP 5791 g10942 i0 85.946 3.62162162162162 185 20 98 6 1 182 156 337 Slime mold (P.polycephalum) 28S large subunit rRNA, 5' end blastn 670 193 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Physariida Physaraceae Physarum Physarum polycephalum
10983196 10983196 PRJNA795663_S_NODE_11149_length_185_cov_1.229730_g11044_i0 PRJNA795663 11149 185 1.22973 2.2750005 Physarum sp. 31288 Evosea other_Eukaryota 281 1.8500000000000002e-71   NTclustered gi|2747358420|gb|PP951386.1| 31288 g11044 i0 97.561 89.4648648648649 164 4 89 0 22 185 202 365 Physarum sp. voucher HMJAU M20294-1 small subunit ribosomal RNA gene, partial sequence blastn 16551 281 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Physariida Physaraceae Physarum Physarum sp.
10983378 10983378 PRJNA795663_S_NODE_3209_length_320_cov_2.462898_g3104_i0 PRJNA795663 3209 320 2.462898 7.8812736 Arcyria insignis 1258713 Evosea other_Eukaryota 255 2.13e-63   NTclustered gi|2250222318|gb|ON713405.1| 1258713 g3104 i0 84.733 9.3 262 32 81 8 61 318 898 1155 Arcyria insignis voucher MA87859 small subunit ribosomal RNA gene, partial sequence blastn 2976 255 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Trichiida Trichiidae Arcyria Arcyria insignis
12258991 12258991 PRJNA795663_S_NODE_5470_length_250_cov_2.352113_g5365_i0 PRJNA795663 5470 250 2.352113 5.8802825 Physarum polycephalum 5791 Evosea other_Eukaryota 141 1.46e-39   NR ABL84200.1 5791 g5365 i0 91.1 0.948 79 7 94.8 0 13 249 58 136 ABL84200.1 14-3-3-like protein [Physarum polycephalum] diamond 237 141 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Physariida Physaraceae Physarum Physarum polycephalum
13533068 13533068 PRJNA795663_S_NODE_3051_length_327_cov_7.379310_g2946_i0 PRJNA795663 3051 327 7.37931 24.1303437 Amoebozoa sp. 1892891 Root_unresolved Root_unresolved 178 4.86e-40   NTclustered gi|2651357789|gb|PP174304.1| 1892891 g2946 i0 82.464 6.44036697247706 211 29 64 8 1 209 2799 3003 Amoebozoa sp. isolate 114_WLI small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 2106 178 1 Eukaryota Amoebozoa             Amoebozoa sp.
14808127 14808127 PRJNA795663_S_NODE_8752_length_204_cov_1.604790_g8647_i0 PRJNA795663 8752 204 1.60479 3.2737716 Thecamoeba similis 242545 Discosea other_Eukaryota 178 2.81e-40   NTclustered gi|33946350|gb|AY294154.1| 242545 g8647 i0 83.957 18.3921568627451 187 28 91 2 8 193 657 842 Thecamoeba similis actin mRNA, complete cds blastn 3752 178 1 Eukaryota Amoebozoa   Discosea   Longamoebia Thecamoebida Thecamoeba Thecamoeba similis
17357596 17357596 PRJNA795663_S_NODE_1034_length_528_cov_13.411405_g938_i0 PRJNA795663 1034 528 13.411405 70.8122184 Trichia varia 647298 Evosea other_Eukaryota 224 1.04e-53   NTclustered gi|855588934|gb|KM494992.1| 647298 g938 i0 75.556 68.657196969697 540 87 97 33 1 512 1920 2442 Trichia varia voucher sc27870 18S ribosomal RNA genes, partial sequence blastn 36251 224 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Trichiida Trichiidae Trichia Trichia varia
17357807 17357807 PRJNA795663_S_NODE_414_length_763_cov_5.483471_g343_i0 PRJNA795663 414 763 5.483471 41.83888373 Physarum polycephalum 5791 Evosea other_Eukaryota 148 9.49e-31   NTclustered gi|3221|emb|V01159.1| 5791 g343 i0 84.314 14.605504587156 153 23 20 1 390 542 1243 1092 Physarum polycephalum gene encoding 5.8S rRNA and 26S rRNA blastn 11144 148 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Physariida Physaraceae Physarum Physarum polycephalum
18630914 18630914 PRJNA795663_S_NODE_17835_length_153_cov_2.646552_g17730_i0 PRJNA795663 17835 153 2.646552 4.04922456 Eumycetozoa 142796 Evosea other_Eukaryota 92.4 1.37e-20   NR KAF2073131.1 133409 g17730 i0 80.4 4 51 10 100 0 153 1 181 231 KAF2073131.1 hypothetical protein CYY_005547 [Polysphondylium violaceum] diamond 612 92.4 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Polysphondylium Polysphondylium violaceum
19906075 19906075 PRJNA795663_S_NODE_1416_length_465_cov_14.621495_g1311_i0 PRJNA795663 1416 465 14.621495 67.98995175 Echinostelium minutum 300235 Evosea other_Eukaryota 143 2.61e-29   NTclustered gi|381139237|emb|HE655044.1| 300235 g1311 i0 91.429 15.8279569892473 105 7 22 2 16 119 809 706 Echinostelium minutum partial 28S rRNA gene, strain ATCC 22345 blastn 7360 143 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Echinosteliales Echinosteliidae Echinostelium Echinostelium minutum
19906279 19906279 PRJNA795663_S_NODE_7036_length_224_cov_2.508021_g6931_i0 PRJNA795663 7036 224 2.508021 5.61796704 Physarum pseudonotabile 1158133 Evosea other_Eukaryota 219 1.85e-52   NTclustered gi|379141567|gb|JQ478431.1| 1158133 g6931 i0 87.113 60.4285714285714 194 24 87 1 31 224 812 1004 Physarum pseudonotabile voucher 255438 LE 18S ribosomal RNA gene, partial sequence blastn 13536 219 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Physariida Physaraceae Physarum Physarum pseudonotabile
21181769 21181769 PRJNA795663_S_NODE_1237_length_491_cov_4.502203_g1135_i0 PRJNA795663 1237 491 4.502203 22.10581673 Echinostelium bisporum 1973072 Evosea other_Eukaryota 379 1.93e-100   NTclustered gi|1465309735|gb|MH809395.1| 1973072 g1135 i0 81.174 30.680244399185305 494 73 100 17 1 491 569 1045 Echinostelium bisporum isolate Nx14-A1 small subunit ribosomal RNA gene, partial sequence blastn 15064 379 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Echinosteliales Echinosteliidae Echinostelium Echinostelium bisporum
21181908 21181908 PRJNA795663_S_NODE_2117_length_386_cov_11.833811_g2012_i0 PRJNA795663 2117 386 11.833811 45.67851046 Soliformovum expulsum 435423 Evosea other_Eukaryota 344 5.43e-90   NTclustered gi|260909293|gb|FJ766479.1| 435423 g2012 i0 83.12 33.7979274611399 391 50 100 13 1 386 31 410 Soliformovum expulsum culture-collection ATCC:48083 clone pool B 18S ribosomal RNA gene, partial sequence blastn 13046 344 1 Eukaryota Amoebozoa   Evosea Variosea Fractovitellida Soliformoviidae Soliformovum Soliformovum expulsum
21181930 21181930 PRJNA795663_S_NODE_3617_length_303_cov_4.383459_g3512_i0 PRJNA795663 3617 303 4.383459 13.28188077 uncultured Vannellidae 544561 Discosea other_Eukaryota 246 1.21e-60   NTclustered gi|724028230|gb|KP099889.1| 544561 g3512 i0 81.699 43.1551155115512 306 47 100 8 1 303 539 838 Uncultured Vannellidae clone b18 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 13076 246 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae   uncultured Vannellidae
22456601 22456601 PRJNA795663_S_NODE_4238_length_282_cov_3.126531_g4133_i0 PRJNA795663 4238 282 3.126531 8.81681742 Physarum polycephalum 5791 Evosea other_Eukaryota 250 8.589999999999999e-62   NTclustered gi|3185|emb|X60211.1| 5791 g4133 i0 83.453 41.6418439716312 278 37 96 9 1 272 42 316 P.polycephalum 26S rRNA blastn 11743 250 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Physariida Physaraceae Physarum Physarum polycephalum
23732174 23732174 PRJNA795663_S_NODE_15419_length_162_cov_1.648000_g15314_i0 PRJNA795663 15419 162 1.648 2.66976 Arcyria cinerea 137621 Evosea other_Eukaryota 115 1.7e-21   NTclustered gi|2698738397|gb|PP491463.1| 137621 g15314 i0 87.255 3.79012345679012 102 11 62 2 30 130 3096 3196 Arcyria cinerea voucher TUF132348 internal transcribed spacer region, partial sequence blastn 614 115 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Trichiida Trichiidae Arcyria Arcyria cinerea
23732296 23732296 PRJNA795663_S_NODE_4479_length_275_cov_3.764706_g4374_i0 PRJNA795663 4479 275 3.764706 10.3529415 Dianema subretisporum 1182205 Evosea other_Eukaryota 250 8.35e-62   NTclustered gi|2250222329|gb|ON713412.1| 1182205 g4374 i0 89.163 77.2509090909091 203 19 73 2 76 275 460 662 Dianema subretisporum voucher MM31413 small subunit ribosomal RNA gene, partial sequence blastn 21244 250 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Trichiida Dianemataceae Dianema Dianema subretisporum
24167976 24167976 PRJNA795663_S_NODE_2079_length_389_cov_10.198864_g1974_i0 PRJNA795663 2079 389 10.198864 39.67358096 Physarum 5790 Evosea other_Eukaryota 593 4.919999999999999e-165   NTclustered gi|1084358402|gb|KT922086.1| 289951 g1974 i0 95.687 92.6195372750643 371 12 95 4 21 388 99 468 Physarum cinereum 18S ribosomal RNA gene, partial sequence blastn 36029 593 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Physariida Physaraceae Physarum Physarum cinereum
25005808 25005808 PRJNA795663_S_NODE_1860_length_410_cov_12.163539_g1755_i0 PRJNA795663 1860 410 12.163539 49.8705099 uncultured Vannellidae 544561 Discosea other_Eukaryota 161 6.27e-35   NTclustered gi|724028223|gb|KP099882.1| 544561 g1755 i0 97.849 19.780487804878 93 2 23 0 1 93 831 923 Uncultured Vannellidae clone b25 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 8110 161 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae   uncultured Vannellidae
26873410 26873410 PRJNA795663_S_NODE_15901_length_160_cov_2.186992_g15796_i0 PRJNA795663 15901 160 2.186992 3.4991872 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 87.8 2.21e-20   NR XP_004333194.1 1257118 g15796 i0 73.6 1.9875 53 14 99.4 0 159 1 34 86 XP_004333194.1 guanine nucleotidebinding protein alpha-1 subunit [Acanthamoeba castellanii str. Neff] diamond 318 88.2 0.99546485260771 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
27022219 27022219 PRJNA795663_S_NODE_10482_length_189_cov_1.967105_g10377_i0 PRJNA795663 10482 189 1.967105 3.71782845 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 50.8 2.62e-5   NR PRP74122.1 1890364 g10377 i0 31.7 1 63 43 100 0 1 189 823 885 PRP74122.1 hypothetical protein PROFUN_06447 [Planoprotostelium fungivorum] diamond 189 50.8 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum
28253916 28253916 PRJNA795663_S_NODE_9706_length_195_cov_2.183544_g9601_i0 PRJNA795663 9706 195 2.183544 4.2579108 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 82.4 3.48e-18   NR XP_004337874.1 1257118 g9601 i0 69.1 0.846153846153846 55 16 84.6 1 167 3 23 76 XP_004337874.1 uncharacterized protein ACA1_187480 [Acanthamoeba castellanii str. Neff] diamond 165 82.4 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
28538372 28538372 PRJNA795663_S_NODE_7187_length_222_cov_2.443243_g7082_i0 PRJNA795663 7187 222 2.443243 5.42399946 Tieghemostelium lacteum 361077 Evosea other_Eukaryota 102 9.09e-24   NR KYQ89608.1 361077 g7082 i0 61.1 3.89189189189189 72 28 97.3 0 7 222 109 180 KYQ89608.1 G-protein subunit alpha 1 [Tieghemostelium lacteum] diamond 864 102 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Raperosteliaceae Tieghemostelium Tieghemostelium lacteum
28821991 28821991 PRJNA795663_S_NODE_9168_length_200_cov_1.644172_g9063_i0 PRJNA795663 9168 200 1.644172 3.288344 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 97.4 9.79e-22   NR PRP86204.1 1890364 g9063 i0 62.7 1.005 67 24 99 1 200 3 253 319 PRP86204.1 guanine nucleotide-binding protein G(i) subunit alpha-2 [Planoprotostelium fungivorum] diamond 201 97.4 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum
29359128 29359128 PRJNA795663_S_NODE_8449_length_207_cov_2.029412_g8344_i0 PRJNA795663 8449 207 2.029412 4.20088284 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 70.1 5.14e-12   NR XP_004337380.1 1257118 g8344 i0 48.5 1.91304347826087 66 33 94.2 1 1 195 309 374 XP_004337380.1 GTPaseactivating protein [Acanthamoeba castellanii str. Neff] diamond 396 70.1 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
29642890 29642890 PRJNA795663_S_NODE_17010_length_156_cov_1.840336_g16905_i0 PRJNA795663 17010 156 1.840336 2.87092416 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 50.8 1.39e-5   NR PRP85964.1 1890364 g16905 i0 59.5 0.711538461538462 37 15 71.2 0 149 39 226 262 PRP85964.1 hypothetical protein PROFUN_06086 [Planoprotostelium fungivorum] diamond 111 50.8 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum
29927626 29927626 PRJNA795663_S_NODE_3011_length_329_cov_2.503425_g2906_i0 PRJNA795663 3011 329 2.503425 8.23626825 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 161 5.46e-44   NR XP_004368005.1 1257118 g2906 i0 66.1 1.98784194528875 109 37 99.4 0 328 2 416 524 XP_004368005.1 GTPase activating Rap/RanGAP domainlike 3, putative [Acanthamoeba castellanii str. Neff] diamond 654 161 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
30275252 30275252 PRJNA795663_S_NODE_16132_length_159_cov_2.713115_g16027_i0 PRJNA795663 16132 159 2.713115 4.31385285 Acytostelium subglobosum LB1 1410327 Evosea other_Eukaryota 61.2 3.6e-9   NR XP_012750061.1 1410327 g16027 i0 61.7 1.75471698113208 47 18 88.7 0 159 19 423 469 XP_012750061.1 hypothetical protein SAMD00019534_103560 [Acytostelium subglobosum LB1] diamond 279 61.2 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Acytostelium Acytostelium subglobosum
31295239 31295239 PRJNA795663_S_NODE_9515_length_197_cov_1.431250_g9410_i0 PRJNA795663 9515 197 1.43125 2.8195625 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 42 0.0387   NR KYQ92121.1 361077 g9410 i0 30.8 1.49238578680203 65 44 99 1 197 3 553 616 KYQ92121.1 RapGAP/RanGAP domain-containing protein [Tieghemostelium lacteum] diamond 294 42.4 0.990566037735849 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Raperosteliaceae Tieghemostelium Tieghemostelium lacteum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;