RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

15 rows where bioproject = "PRJNA793147" and tax_phylum = "Rotifera"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Rotifera · 15 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA793147 · 15 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7156722 7156722 PRJNA793147_P_NODE_63426_length_214_cov_2.055172_g63160_i0 PRJNA793147 63426 214 2.055172 4.39806808 Seison nebaliae 104778 Rotifera other_Eukaryota 94 7.94e-22   NR KAI3380233.1 104778 g63160 i0 68.4 1.5981308411215 57 18 79.9 0 43 213 143 199 KAI3380233.1 hypothetical protein SNEBB_010801 [Seison nebaliae] diamond 342 94 1 Eukaryota Opisthokonta Metazoa Rotifera Pararotatoria Seisonacea Seisonidae Seison Seison nebaliae
10981708 10981708 PRJNA793147_P_NODE_3489_length_1011_cov_23.877919_g3300_i0 PRJNA793147 3489 1011 23.877919 241.40576109 Rotaria sordida 392033 Rotifera other_Eukaryota 276 1.75e-85   NR CAF1213640.1 392033 g3300 i0 47.4 9.49851632047478 310 155 89.9 6 50 958 195 503 CAF1213640.1 unnamed protein product [Rotaria sordida] diamond 9603 276 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Rotaria Rotaria sordida
13530984 13530984 PRJNA793147_P_NODE_12071_length_494_cov_3.211765_g11806_i0 PRJNA793147 12071 494 3.211765 15.8661191 Eurotatoria 2816136 Rotifera other_Eukaryota 248 7.62e-79   NR RNA34891.1 10195 g11806 i0 73 5.93927125506073 163 44 99 0 494 6 199 361 RNA34891.1 putative isocitrate dehydrogenase [NAD] subunit mitochondrial isoform X2 [Brachionus plicatilis] diamond 2934 248 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus plicatilis
27306783 27306783 PRJNA793147_P_NODE_21263_length_361_cov_5.828767_g20997_i0 PRJNA793147 21263 361 5.828767 21.04184887 Seison nebaliae 104778 Rotifera other_Eukaryota 77.8 7.99e-16   NR KAI3380542.1 104778 g20997 i0 40.7 0.756232686980609 91 54 75.6 0 14 286 11 101 KAI3380542.1 hypothetical protein SNEBB_010553 [Seison nebaliae] diamond 273 77.8 1 Eukaryota Opisthokonta Metazoa Rotifera Pararotatoria Seisonacea Seisonidae Seison Seison nebaliae
28294623 28294623 PRJNA793147_P_NODE_50506_length_235_cov_1.734940_g50240_i0 PRJNA793147 50506 235 1.73494 4.077109 Eurotatoria 2816136 Rotifera other_Eukaryota 50.4 6.49e-5   NR UJR28749.1 104782 g50240 i0 41.6 5.82127659574468 77 32 97 2 232 5 51 115 UJR28749.1 hypothetical protein I4U23_009976 [Adineta vaga] diamond 1368 50.8 0.992125984251969 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta vaga
28790557 28790557 PRJNA793147_P_NODE_28927_length_310_cov_1.792531_g28661_i0 PRJNA793147 28927 310 1.792531 5.5568461 Brachionus calyciflorus 104777 Rotifera other_Eukaryota 43.5 0.0383   NR CAF1003086.1 104777 g28661 i0 34.8 0.667741935483871 69 43 64.8 1 221 21 145 213 CAF1003086.1 unnamed protein product [Brachionus calyciflorus] diamond 207 43.5 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus calyciflorus
29642871 29642871 PRJNA793147_P_NODE_37030_length_276_cov_1.729469_g36764_i0 PRJNA793147 37030 276 1.729469 4.77333444 Brachionus calyciflorus 104777 Rotifera other_Eukaryota 83.6 6.92e-18   NR CAF1076524.1 104777 g36764 i0 44 0.989130434782609 91 50 98.9 1 275 3 65 154 CAF1076524.1 unnamed protein product [Brachionus calyciflorus] diamond 273 83.6 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus calyciflorus
30116857 30116857 PRJNA793147_P_NODE_37352_length_275_cov_1.398058_g37086_i0 PRJNA793147 37352 275 1.398058 3.8446595 Didymodactylos carnosus 1234261 Rotifera other_Eukaryota 65.5 3.07e-10   NR CAF1275845.1 1234261 g37086 i0 39.6 0.992727272727273 91 46 99.3 2 2 274 133 214 CAF1275845.1 unnamed protein product, partial [Didymodactylos carnosus] diamond 273 65.5 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Didymodactylos Didymodactylos carnosus
30116859 30116859 PRJNA793147_P_NODE_43412_length_256_cov_1.229947_g43146_i0 PRJNA793147 43412 256 1.229947 3.14866432 Didymodactylos carnosus 1234261 Rotifera other_Eukaryota 134 5.19e-36   NR CAF0920811.1 1234261 g43146 i0 71.4 4.96875 84 23 97.3 1 8 256 165 248 CAF0920811.1 unnamed protein product [Didymodactylos carnosus] diamond 1272 134 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Didymodactylos Didymodactylos carnosus
30379288 30379288 PRJNA793147_P_NODE_37312_length_275_cov_1.718447_g37046_i0 PRJNA793147 37312 275 1.718447 4.72572925 Eurotatoria 2816136 Rotifera other_Eukaryota 92.8 1.19e-19   NR UJR21382.1 104782 g37046 i0 51.3 9.94909090909091 76 37 82.9 0 235 8 41 116 UJR21382.1 hypothetical protein I4U23_024474 [Adineta vaga] diamond 2736 92.8 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta vaga
30843794 30843794 PRJNA793147_P_NODE_46434_length_247_cov_1.567416_g46168_i0 PRJNA793147 46434 247 1.567416 3.87151752 Brachionus plicatilis 10195 Rotifera other_Eukaryota 77.8 8.51e-15   NR RNA02720.1 10195 g46168 i0 43.9 7.96761133603239 82 46 99.6 0 246 1 29 110 RNA02720.1 mitochondrial import receptor subunit TOM40 -like protein [Brachionus plicatilis] diamond 1968 77.8 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus plicatilis
30916199 30916199 PRJNA793147_P_NODE_16534_length_414_cov_3.492754_g16268_i0 PRJNA793147 16534 414 3.492754 14.46000156 Opisthokonta 33154 Rotifera other_Eukaryota 106 8.38e-27   NR RNA11463.1 10195 g16268 i0 47.5 4.93478260869565 99 52 71.7 0 5 301 2 100 RNA11463.1 cytosolic thioredoxin Trx1 [Brachionus plicatilis] diamond 2043 106 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus plicatilis
31033553 31033553 PRJNA793147_P_NODE_5315_length_793_cov_4.084254_g5087_i0 PRJNA793147 5315 793 4.084254 32.38813422 Didymodactylos carnosus 1234261 Rotifera other_Eukaryota 76.6 9.08e-12   NR CAF0935251.1 1234261 g5087 i0 29.8 3.03026481715006 275 152 90.4 9 3 719 338 607 CAF0935251.1 unnamed protein product [Didymodactylos carnosus] diamond 2403 76.6 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Didymodactylos Didymodactylos carnosus
31096358 31096358 PRJNA793147_P_NODE_57235_length_230_cov_0.894410_g56969_i0 PRJNA793147 57235 230 0.89441 2.057143 Rotaria sordida 392033 Rotifera other_Eukaryota 62.8 1.81e-9   NR CAF1052887.1 392033 g56969 i0 49.3 8.12608695652174 71 33 88.7 2 204 1 96 166 CAF1052887.1 unnamed protein product [Rotaria sordida] diamond 1869 62.8 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Rotaria Rotaria sordida
32266971 32266971 PRJNA793147_P_NODE_36678_length_277_cov_14.274038_g36412_i0 PRJNA793147 36678 277 14.274038 39.53908526 Rotaria sp. Silwood2 2762512 Rotifera other_Eukaryota 46.2 0.00163   NR CAF2736995.1 2762512 g36412 i0 42.6 1.16967509025271 54 31 58.5 0 228 67 84 137 CAF2736995.1 unnamed protein product [Rotaria sp. Silwood2] diamond 324 46.2 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Rotaria Rotaria sp. Silwood2

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;