RNAquarium Metadata Server
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contig_metadata

7 rows where bioproject = "PRJNA793147" and tax_phylum = "Ciliophora"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Ciliophora · 7 ✖

tax_clade 1

bioproject 1

  • PRJNA793147 · 7 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
21179909 21179909 PRJNA793147_P_NODE_14937_length_439_cov_2.210811_g14671_i0 PRJNA793147 14937 439 2.210811 9.70546029 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 280 4.18e-92   NR TNV77769.1 5974 g14671 i0 87 118.715261958998 146 19 99.8 0 1 438 8 153 TNV77769.1 hypothetical protein FGO68_gene430 [Halteria grandinella] diamond 52116 281 0.99644128113879 Eukaryota Sar   Ciliophora Spirotrichea Sporadotrichida Halteriidae Halteria Halteria grandinella
21180683 21180683 PRJNA793147_P_NODE_55957_length_231_cov_0.888889_g55691_i0 PRJNA793147 55957 231 0.888889 2.05333359 Paramecium tetraurelia 5888 SAR_Eukaryotes SAR_Eukaryotes 52.8 0.021   NTclustered gi|145490735|ref|XM_001431331.1| 5888 g55691 i0 100 0.121212121212121 28 0 12 0 204 231 885 912 Paramecium tetraurelia uncharacterized protein (GSPATT00033823001), partial mRNA blastn 28 52.8 1 Eukaryota Sar   Ciliophora Oligohymenophorea Peniculida Parameciidae Paramecium Paramecium tetraurelia
25004751 25004751 PRJNA793147_P_NODE_7980_length_625_cov_3.658273_g7723_i0 PRJNA793147 7980 625 3.658273 22.86420625 Tetrahymena thermophila 5911 SAR_Eukaryotes SAR_Eukaryotes 54.7 0.017   NTclustered gi|829186935|ref|XM_001022570.3| 312017 g7723 i0 100 0.0464 29 0 5 0 196 224 1636 1608 Tetrahymena thermophila SB210 Serine/Threonine kinase domain protein partial mRNA blastn 29 54.7 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena thermophila
26714449 26714449 PRJNA793147_P_NODE_52181_length_234_cov_0.872727_g51915_i0 PRJNA793147 52181 234 0.872727 2.04218118 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 87.8 5.22e-19   NR CAD8059241.1 5886 g51915 i0 51.9 5.91025641025641 77 37 98.7 0 232 2 149 225 CAD8059241.1 unnamed protein product [Paramecium primaurelia] diamond 1383 88.2 0.99546485260771 Eukaryota Sar   Ciliophora Oligohymenophorea Peniculida Parameciidae Paramecium Paramecium primaurelia
26841669 26841669 PRJNA793147_P_NODE_43561_length_255_cov_1.935484_g43295_i0 PRJNA793147 43561 255 1.935484 4.9354842 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 111 1.6500000000000002e-26   NR OMJ75212.1 5963 g43295 i0 58.3 23.5529411764706 84 35 98.8 0 2 253 396 479 OMJ75212.1 hypothetical protein SteCoe_25688 [Stentor coeruleus] diamond 6006 111 1 Eukaryota Sar   Ciliophora Heterotrichea Heterotrichida Stentoridae Stentor Stentor coeruleus
28033086 28033086 PRJNA793147_P_NODE_46425_length_247_cov_1.601124_g46159_i0 PRJNA793147 46425 247 1.601124 3.95477628 Pseudocohnilembus persalinus 266149 SAR_Eukaryotes SAR_Eukaryotes 58.2 1.45e-7   NR KRX07221.1 266149 g46159 i0 50.9 0.668016194331984 55 27 66.8 0 1 165 579 633 KRX07221.1 Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II [Pseudocohnilembus persalinus] diamond 165 58.2 1 Eukaryota Sar   Ciliophora Oligohymenophorea Philasterida Pseudocohnilembidae Pseudocohnilembus Pseudocohnilembus persalinus
30243481 30243481 PRJNA793147_P_NODE_49892_length_237_cov_1.428571_g49626_i0 PRJNA793147 49892 237 1.428571 3.38571327 Moneuplotes crassus 5936 SAR_Eukaryotes SAR_Eukaryotes 47.4 7.7e-4   NR CAI2369761.1 5936 g49626 i0 50 1.24050632911392 30 15 38 0 115 26 28 57 CAI2369761.1 unnamed protein product [Moneuplotes crassus] diamond 294 47.4 1 Eukaryota Sar   Ciliophora Spirotrichea Euplotida Euplotidae Moneuplotes Moneuplotes crassus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;