RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA793147", tax_clade = "PVC group" and tax_phylum = "Planctomycetota"

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tax_superkingdom 1

tax_phylum 1

  • Planctomycetota · 2 ✖

tax_kingdom 1

tax_clade 1

  • PVC group · 2 ✖

bioproject 1

  • PRJNA793147 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
8431185 8431185 PRJNA793147_P_NODE_50627_length_235_cov_1.445783_g50361_i0 PRJNA793147 50627 235 1.445783 3.39759005 Isosphaeraceae bacterium 2691532 Bacteria Bacteria 89 1.73e-18   NR HEX8202549.1 2691532 g50361 i0 64.7 0.868085106382979 68 23 86.8 1 31 234 454 520 HEX8202549.1 hypothetical protein [Isosphaeraceae bacterium] diamond 204 89 1 Bacteria PVC group Pseudomonadati Planctomycetota Planctomycetia Isosphaerales Isosphaeraceae   Isosphaeraceae bacterium
29579783 29579783 PRJNA793147_P_NODE_33130_length_291_cov_3.887387_g32864_i0 PRJNA793147 33130 291 3.887387 11.31229617 Thermoguttaceae bacterium 2691551 Bacteria Bacteria 53.1 1.47e-5   NR MBQ9372032.1 2691551 g32864 i0 40.3 0.742268041237113 72 42 74.2 1 6 221 969 1039 MBQ9372032.1 fibronectin type III domain-containing protein [Thermoguttaceae bacterium] diamond 216 53.1 1 Bacteria PVC group Pseudomonadati Planctomycetota Planctomycetia Pirellulales Thermoguttaceae   Thermoguttaceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;