RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA793147" and tax_clade = "Haptista"

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tax_superkingdom 1

tax_phylum 1

tax_clade 1

  • Haptista · 3 ✖

bioproject 1

  • PRJNA793147 · 3 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
21180243 21180243 PRJNA793147_P_NODE_33477_length_290_cov_1.511312_g33211_i0 PRJNA793147 33477 290 1.511312 4.3828048 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 139 1.28e-36   NR KAG8462597.1 2081491 g33211 i0 60.4 11.9172413793103 96 38 99.3 0 1 288 315 410 KAG8462597.1 hypothetical protein KFE25_010422 [Diacronema lutheri] diamond 3456 139 1 Eukaryota Haptista   Haptophyta Pavlovophyceae Pavlovales Pavlovaceae Diacronema Diacronema lutheri
29201314 29201314 PRJNA793147_P_NODE_9049_length_582_cov_15.042885_g8788_i0 PRJNA793147 9049 582 15.042885 87.5495907 Prymnesium parvum 97485 Haptophyta other_Eukaryota 106 1.55e-25   NR KAL1499813.1 97485 g8788 i0 39.9 0.737113402061856 143 77 73.7 3 540 112 16 149 KAL1499813.1 hypothetical protein AB1Y20_012498 [Prymnesium parvum] diamond 429 106 1 Eukaryota Haptista   Haptophyta   Prymnesiales Prymnesiaceae Prymnesium Prymnesium parvum
31127662 31127662 PRJNA793147_P_NODE_55375_length_231_cov_1.432099_g55109_i0 PRJNA793147 55375 231 1.432099 3.30814869 Prymnesium parvum 97485 Haptophyta other_Eukaryota 75.5 3.64e-14   NR KAL1522205.1 97485 g55109 i0 48.7 3.80519480519481 76 38 97.4 1 6 230 139 214 KAL1522205.1 hypothetical protein AB1Y20_021843 [Prymnesium parvum] diamond 879 75.5 1 Eukaryota Haptista   Haptophyta   Prymnesiales Prymnesiaceae Prymnesium Prymnesium parvum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;