RNAquarium Metadata Server
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contig_metadata

7 rows where bioproject = "PRJNA792582" and tax_phylum = "Rotifera"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Rotifera · 7 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA792582 · 7 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2052946 2052946 PRJNA792582_P_NODE_41302_length_274_cov_1.557214_g40488_i0 PRJNA792582 41302 274 1.557214 4.26676636 Mytilina ventralis 360682 Rotifera other_Eukaryota 296 1.05e-75   NTclustered gi|83285200|gb|DQ297747.1| 360682 g40488 i0 87.549 6.30656934306569 257 31 93 1 19 274 593 337 Mytilina ventralis 28S ribosomal RNA gene, partial sequence blastn 1728 296 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Mytilina Mytilina ventralis
27938305 27938305 PRJNA792582_P_NODE_60025_length_237_cov_2.371951_g59211_i0 PRJNA792582 60025 237 2.371951 5.62152387 Rotaria sp. Silwood2 2762512 Rotifera other_Eukaryota 40 0.0403   NR CAF3306560.1 2762512 g59211 i0 64.5 0.392405063291139 31 11 39.2 0 129 221 5 35 CAF3306560.1 unnamed protein product, partial [Rotaria sp. Silwood2] diamond 93 40 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Rotaria Rotaria sp. Silwood2
29115715 29115715 PRJNA792582_P_NODE_44228_length_266_cov_1.595855_g43414_i0 PRJNA792582 44228 266 1.595855 4.2449743 Adineta 104781 Rotifera other_Eukaryota 136 2.11e-36   NR UJR20801.1 104782 g43414 i0 75 44.4924812030075 88 22 99.2 0 2 265 54 141 UJR20801.1 hypothetical protein I4U23_023914 [Adineta vaga] diamond 11835 136 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta vaga
29368249 29368249 PRJNA792582_P_NODE_25189_length_344_cov_1.955720_g24375_i0 PRJNA792582 25189 344 1.95572 6.7276768 Metazoa 33208 Rotifera other_Eukaryota 84.7 1.31e-16   NR RNA03008.1 10195 g24375 i0 80 1.6046511627907 45 9 39.2 0 344 210 328 372 RNA03008.1 Methionine aminopeptidase 1 [Brachionus plicatilis] diamond 552 84.7 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus plicatilis
30536899 30536899 PRJNA792582_P_NODE_7493_length_612_cov_1.721707_g6705_i0 PRJNA792582 7493 612 1.721707 10.53684684 Metazoa 33208 Rotifera other_Eukaryota 231 1.82e-70   NR UJR29393.1 104782 g6705 i0 53.4 12.9117647058824 204 95 100 0 612 1 58 261 UJR29393.1 hypothetical protein I4U23_010605 [Adineta vaga] diamond 7902 233 0.991416309012876 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta vaga
31665561 31665561 PRJNA792582_P_NODE_8697_length_573_cov_1.874000_g7901_i0 PRJNA792582 8697 573 1.874 10.73802 Rotaria magnacalcarata 392030 Rotifera other_Eukaryota 42.4 0.0431   NR CAF4909986.1 392030 g7901 i0 43.9 0.214659685863874 41 23 21.5 0 363 241 8 48 CAF4909986.1 unnamed protein product, partial [Rotaria magnacalcarata] diamond 123 42.4 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Rotaria Rotaria magnacalcarata
32203480 32203480 PRJNA792582_P_NODE_21478_length_372_cov_1.030100_g20664_i0 PRJNA792582 21478 372 1.0301 3.831972 Rotaria magnacalcarata 392030 Rotifera other_Eukaryota 84 5.24e-16   NR CAF1570775.1 392030 g20664 i0 35.2 4.03225806451613 125 77 99.2 2 371 3 88 210 CAF1570775.1 unnamed protein product [Rotaria magnacalcarata] diamond 1500 84 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Rotaria Rotaria magnacalcarata

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;