RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA792582" and tax_phylum = "Negarnaviricota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Negarnaviricota · 4 ✖

tax_kingdom 1

bioproject 1

  • PRJNA792582 · 4 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5880218 5880218 PRJNA792582_P_NODE_11165_length_509_cov_6.298165_g10356_i0 PRJNA792582 11165 509 6.298165 32.05765985 Goose orthorubulavirus 5 3384030 Viruses Viruses 163 2.21e-35   NTclustered gi|2839303692|gb|PQ456202.1| 3384030 g10356 i0 98.901 0.717092337917485 91 1 18 0 272 362 1 91 Goose orthorubulavirus 5 isolate YN01/PIV5, complete genome blastn 365 163 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae Orthorubulavirus Goose orthorubulavirus 5
28799639 28799639 PRJNA792582_P_NODE_52987_length_248_cov_0.880000_g52173_i0 PRJNA792582 52987 248 0.88 2.1824 Chuvivirus 2842604 Viruses Viruses 120 8.700000000000001e-30   NR WET19887.1 2842604 g52173 i0 67.1 2.9758064516129 82 27 99.2 0 246 1 307 388 WET19887.1 MAG: nucleoprotein [Freshwater turtle neural virus 1] diamond 738 120 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Jingchuvirales Chuviridae Chuvivirus Chuvivirus
29485045 29485045 PRJNA792582_P_NODE_50_length_4016_cov_4.019021_g34_i0 PRJNA792582 50 4016 4.019021 161.40388336 Zebrafish neural hantavirus RQ06 Viruses Viruses 251 3.29e-70   NR QUF61514.1 RQ06 g34 i0 37.6 0.289840637450199 388 202 28.9 6 2481 3641 23 371 QUF61514.1 RNA-dependent RNA polymerase, partial [Murray-Darling rainbowfish hantavirus] diamond 1164 251 1 Viruses   Orthornavirae Negarnaviricota Bunyaviricetes Elliovirales Hantaviridae   Zebrafish neural hantavirus
31033526 31033526 PRJNA792582_P_NODE_3995_length_816_cov_1.592194_g3328_i0 PRJNA792582 3995 816 1.592194 12.99230304 African cichlid piscichuvirus 3065075 Viruses Viruses 130 4.97e-30   NR WLN26256.1 3065075 g3328 i0 46.4 0.507352941176471 138 74 50.7 0 699 286 97 234 WLN26256.1 MAG: L protein, partial [African cichlid piscichuvirus] diamond 414 130 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Jingchuvirales Chuviridae Piscichuvirus African cichlid piscichuvirus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;