RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA792582" and tax_phylum = "Armatimonadota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Armatimonadota · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJNA792582 · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4605190 4605190 PRJNA792582_P_NODE_25204_length_344_cov_1.704797_g24390_i0 PRJNA792582 25204 344 1.704797 5.86450168 uncultured Armatimonadetes bacterium 157466 Bacteria Bacteria 172 2.39e-38   NTclustered gi|2874253689|emb|OY969415.1| 157466 g24390 i0 82.587 38.3866279069767 201 29 58 6 127 324 3914811 3915008 MAG: uncultured Armatimonadetes bacterium isolate MFD00905.bin.2.19 genome assembly, chromosome: 1 blastn 13205 172 1 Bacteria   Bacillati Armatimonadota         uncultured Armatimonadetes bacterium
29516763 29516763 PRJNA792582_P_NODE_49690_length_251_cov_0.865169_g48876_i0 PRJNA792582 49690 251 0.865169 2.17157419 Armatimonadota bacterium 2033014 Bacteria Bacteria 64.3 7.26e-10   NR NSW58610.1 2033014 g48876 i0 57.4 3.26294820717131 47 20 56.2 0 108 248 22 68 NSW58610.1 SMP-30/gluconolactonase/LRE family protein [Armatimonadota bacterium] diamond 819 64.3 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
30653956 30653956 PRJNA792582_P_NODE_50793_length_250_cov_0.870056_g49979_i0 PRJNA792582 50793 250 0.870056 2.17514 Capsulimonas 2494209 Bacteria Bacteria 71.2 1.6e-13   NR WP_119322404.1 2494209 g49979 i0 94.6 0.444 37 2 44.4 0 112 2 1 37 WP_119322404.1 MULTISPECIES: 30S ribosomal protein S12 [Capsulimonas] diamond 111 71.2 1 Bacteria   Bacillati Armatimonadota Armatimonadia Capsulimonadales Capsulimonadaceae Capsulimonas  

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;