contig_metadata
15 rows where bioproject = "PRJNA792582", tax_kingdom = "Pseudomonadati" and tax_phylum = "Bdellovibrionota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 777089 | 777089 | PRJNA792582_P_NODE_52761_length_248_cov_0.880000_g51947_i0 | PRJNA792582 | 52761 | 248 | 0.88 | 2.1824 | Bdellovibrionales bacterium | 2053517 | Bacteria | Bacteria | 137 | 1.6999999999999998e-36 | NR | MCB0412082.1 | 2053517 | g51947 | i0 | 78 | 2.9758064516129 | 82 | 18 | 99.2 | 0 | 248 | 3 | 136 | 217 | MCB0412082.1 DEAD/DEAH box helicase [Bdellovibrionales bacterium] | diamond | 738 | 137 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Bdellovibrionales bacterium | ||||
| 3328251 | 3328251 | PRJNA792582_P_NODE_48863_length_253_cov_1.438889_g48049_i0 | PRJNA792582 | 48863 | 253 | 1.438889 | 3.64038917 | Bdellovibrio sp. ZAP7 | 2231053 | Bacteria | Bacteria | 215 | 2.77e-51 | NTclustered | gi|1700693790|gb|CP030082.1| | 2231053 | g48049 | i0 | 83.55 | 4.81818181818182 | 231 | 36 | 91 | 2 | 23 | 252 | 129669 | 129440 | Bdellovibrio sp. ZAP7 chromosome, complete genome | blastn | 1219 | 215 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio sp. ZAP7 | ||
| 7155333 | 7155333 | PRJNA792582_P_NODE_34946_length_291_cov_1.871560_g34132_i0 | PRJNA792582 | 34946 | 291 | 1.87156 | 5.4462396 | Peredibacter starrii | 28202 | Bacteria | Bacteria | 387 | 6.51e-103 | NTclustered | gi|2631252187|gb|CP139487.1| | 28202 | g34132 | i0 | 90.785 | 144.3264604811 | 293 | 22 | 100 | 5 | 1 | 291 | 510696 | 510985 | Peredibacter starrii strain A3.12 chromosome, complete genome | blastn | 41999 | 387 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bacteriovoracia | Bacteriovoracales | Bacteriovoracaceae | Peredibacter | Peredibacter starrii | ||
| 12256457 | 12256457 | PRJNA792582_P_NODE_30430_length_312_cov_3.016736_g29616_i0 | PRJNA792582 | 30430 | 312 | 3.016736 | 9.41221632 | Peredibacter starrii | 28202 | Bacteria | Bacteria | 538 | 1.8399999999999993e-148 | NTclustered | gi|2631252187|gb|CP139487.1| | 28202 | g29616 | i0 | 97.764 | 193.701923076923 | 313 | 6 | 100 | 1 | 1 | 312 | 511925 | 511613 | Peredibacter starrii strain A3.12 chromosome, complete genome | blastn | 60435 | 538 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bacteriovoracia | Bacteriovoracales | Bacteriovoracaceae | Peredibacter | Peredibacter starrii | ||
| 13969176 | 13969176 | PRJNA792582_P_NODE_17811_length_408_cov_1.970149_g16997_i0 | PRJNA792582 | 17811 | 408 | 1.970149 | 8.03820792 | Bdellovibrio | 958 | Bacteria | Bacteria | 510 | 5.379999999999998e-140 | NTclustered | gi|2800920897|gb|CP168968.1| | 959 | g16997 | i0 | 91.892 | 203.28431372549 | 370 | 23 | 97 | 4 | 45 | 407 | 1607718 | 1607349 | Bdellovibrio bacteriovorus strain Bd5 chromosome, complete genome | blastn | 82940 | 510 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio bacteriovorus | ||
| 15243687 | 15243687 | PRJNA792582_P_NODE_22172_length_366_cov_1.092150_g21358_i0 | PRJNA792582 | 22172 | 366 | 1.09215 | 3.997269 | Peredibacter | 263370 | Bacteria | Bacteria | 542 | 1.69e-149 | NTclustered | gi|2631252187|gb|CP139487.1| | 28202 | g21358 | i0 | 93.443 | 50.7896174863388 | 366 | 23 | 100 | 1 | 1 | 366 | 510724 | 511088 | Peredibacter starrii strain A3.12 chromosome, complete genome | blastn | 18589 | 542 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bacteriovoracia | Bacteriovoracales | Bacteriovoracaceae | Peredibacter | Peredibacter starrii | ||
| 17355068 | 17355068 | PRJNA792582_P_NODE_17254_length_415_cov_1.897661_g16440_i0 | PRJNA792582 | 17254 | 415 | 1.897661 | 7.87529315 | Peredibacter starrii | 28202 | Bacteria | Bacteria | 732 | 0 | NTclustered | gi|2631252187|gb|CP139487.1| | 28202 | g16440 | i0 | 98.554 | 76.9542168674699 | 415 | 5 | 100 | 1 | 1 | 415 | 512315 | 511902 | Peredibacter starrii strain A3.12 chromosome, complete genome | blastn | 31936 | 732 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bacteriovoracia | Bacteriovoracales | Bacteriovoracaceae | Peredibacter | Peredibacter starrii | ||
| 18628442 | 18628442 | PRJNA792582_P_NODE_29595_length_317_cov_1.795082_g28781_i0 | PRJNA792582 | 29595 | 317 | 1.795082 | 5.69040994 | Peredibacter starrii | 28202 | Bacteria | Bacteria | 518 | 2.44e-142 | NTclustered | gi|2631252187|gb|CP139487.1| | 28202 | g28781 | i0 | 96.215 | 153.876971608833 | 317 | 11 | 100 | 1 | 1 | 317 | 512190 | 512505 | Peredibacter starrii strain A3.12 chromosome, complete genome | blastn | 48779 | 518 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bacteriovoracia | Bacteriovoracales | Bacteriovoracaceae | Peredibacter | Peredibacter starrii | ||
| 20342004 | 20342004 | PRJNA792582_P_NODE_54796_length_246_cov_0.890173_g53982_i0 | PRJNA792582 | 54796 | 246 | 0.890173 | 2.18982558 | Pseudobdellovibrio | 2862745 | Bacteria | Bacteria | 409 | 1.1399999999999998e-109 | NTclustered | gi|507148233|ref|NR_103040.1| | 453816 | g53982 | i0 | 96.735 | 90.0447154471545 | 245 | 8 | 99 | 0 | 1 | 245 | 1223 | 1467 | Bdellovibrio exovorus strain JSS 23S ribosomal RNA gene, complete sequence | blastn | 22151 | 409 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Pseudobdellovibrio | Pseudobdellovibrio exovorus | ||
| 21617763 | 21617763 | PRJNA792582_P_NODE_59697_length_241_cov_0.886905_g58883_i0 | PRJNA792582 | 59697 | 241 | 0.886905 | 2.13744105 | Peredibacter starrii | 28202 | Bacteria | Bacteria | 127 | 5.579999999999998e-35 | NR | WP_321393881.1 | 28202 | g58883 | i0 | 72 | 1.15767634854772 | 93 | 10 | 95.9 | 1 | 234 | 4 | 12 | 104 | WP_321393881.1 DUF3015 family protein [Peredibacter starrii] | diamond | 279 | 127 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bacteriovoracia | Bacteriovoracales | Bacteriovoracaceae | Peredibacter | Peredibacter starrii | ||
| 27401572 | 27401572 | PRJNA792582_P_NODE_57563_length_243_cov_0.905882_g56749_i0 | PRJNA792582 | 57563 | 243 | 0.905882 | 2.20129326 | Bdellovibrio sp. SKB1291214 | 1732569 | Bacteria | Bacteria | 67 | 3.02e-12 | NR | WP_088616025.1 | 1732569 | g56749 | i0 | 54.2 | 2.69135802469136 | 72 | 33 | 88.9 | 0 | 223 | 8 | 1 | 72 | WP_088616025.1 ATP synthase F0 subunit C [Bdellovibrio sp. SKB1291214] | diamond | 654 | 67 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio sp. SKB1291214 | ||
| 27654197 | 27654197 | PRJNA792582_P_NODE_54404_length_246_cov_1.323699_g53590_i0 | PRJNA792582 | 54404 | 246 | 1.323699 | 3.25629954 | Bdellovibrionales bacterium | 2053517 | Bacteria | Bacteria | 56.6 | 4.19e-8 | NR | MCB0331116.1 | 2053517 | g53590 | i0 | 46.2 | 3.26829268292683 | 65 | 31 | 79.3 | 1 | 204 | 10 | 16 | 76 | MCB0331116.1 50S ribosomal protein L23 [Bdellovibrionales bacterium] | diamond | 804 | 56.6 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Bdellovibrionales bacterium | ||||
| 28317143 | 28317143 | PRJNA792582_P_NODE_44766_length_265_cov_1.244792_g43952_i0 | PRJNA792582 | 44766 | 265 | 1.244792 | 3.2986988 | Bdellovibrio sp. 28-41-41 | 1970323 | Bacteria | Bacteria | 102 | 4.05e-24 | NR | OYZ24383.1 | 1970323 | g43952 | i0 | 61.8 | 0.860377358490566 | 76 | 28 | 86 | 1 | 36 | 263 | 166 | 240 | OYZ24383.1 MAG: hypothetical protein B7Y39_01625 [Bdellovibrio sp. 28-41-41] | diamond | 228 | 102 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio sp. 28-41-41 | ||
| 29620326 | 29620326 | PRJNA792582_P_NODE_39330_length_279_cov_2.072816_g38516_i0 | PRJNA792582 | 39330 | 279 | 2.072816 | 5.78315664 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 61.2 | 1.9e-9 | NR | MBK7891702.1 | 2053517 | g38516 | i0 | 48.4 | 2.26881720430108 | 64 | 33 | 68.8 | 0 | 241 | 50 | 7 | 70 | MBK7891702.1 flagellar basal body rod protein FlgB [Bdellovibrionales bacterium] | diamond | 633 | 61.2 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Bdellovibrionales bacterium | ||||
| 31136913 | 31136913 | PRJNA792582_P_NODE_54675_length_246_cov_0.890173_g53861_i0 | PRJNA792582 | 54675 | 246 | 0.890173 | 2.18982558 | Bdellovibrionota | 3018035 | Bacteria | Bacteria | 69.3 | 1.39e-11 | NR | WP_325144650.1 | 1971216 | g53861 | i0 | 82.9 | 0.841463414634146 | 35 | 6 | 42.7 | 0 | 244 | 140 | 142 | 176 | WP_325144650.1 IS3 family transposase [Oligoflexus sp.] | diamond | 207 | 69.3 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Oligoflexia | Oligoflexales | Oligoflexaceae | Oligoflexus | Oligoflexus sp. |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;