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contig_metadata

20 rows where bioproject = "PRJNA792582", tax_kingdom = "Pseudomonadati" and tax_phylum = "Acidobacteriota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Acidobacteriota · 20 ✖

tax_kingdom 1

  • Pseudomonadati · 20 ✖

bioproject 1

  • PRJNA792582 · 20 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3328068 3328068 PRJNA792582_P_NODE_33023_length_300_cov_1.356828_g32209_i0 PRJNA792582 33023 300 1.356828 4.070484 Pyrinomonadaceae bacterium 2283092 Bacteria Bacteria 390 5.209999999999999e-104   NTclustered gi|2874253710|emb|OY969475.1| 2283092 g32209 i0 90.132 176.2 304 25 100 5 1 300 1821090 1821392 MAG: Pyrinomonadaceae bacterium isolate MFD01916.bin.c.1 genome assembly, chromosome: 1 blastn 52860 390 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia Blastocatellales Pyrinomonadaceae   Pyrinomonadaceae bacterium
3767096 3767096 PRJNA792582_P_NODE_32643_length_302_cov_1.650655_g31829_i0 PRJNA792582 32643 302 1.650655 4.9849781 Bacteria 2 Bacteria Bacteria 335 2.49e-87   NTclustered gi|2874254061|emb|OY970385.1| 2026791 g31829 i0 87.755 284.033112582781 294 26 97 6 9 301 2775923 2776207 MAG: Bryobacterales bacterium isolate MFD03726.bin.c.1 genome assembly, chromosome: 1 blastn 85778 335 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Bryobacterales     Bryobacterales bacterium
5880619 5880619 PRJNA792582_P_NODE_52385_length_248_cov_1.685714_g51571_i0 PRJNA792582 52385 248 1.685714 4.18057072 uncultured Acidobacteriota bacterium 171953 Bacteria Bacteria 388 1.51e-103   NTclustered gi|2874254091|emb|OY970174.1| 171953 g51571 i0 95.161 440.931451612903 248 9 99 3 3 248 4356911 4357157 MAG: uncultured Acidobacteriota bacterium isolate MFD01275.bin.c.18 genome assembly, chromosome: 1 blastn 109351 388 1 Bacteria   Pseudomonadati Acidobacteriota         uncultured Acidobacteriota bacterium
7155312 7155312 PRJNA792582_P_NODE_32806_length_301_cov_1.960526_g31992_i0 PRJNA792582 32806 301 1.960526 5.90118326 uncultured Bryobacterales bacterium 2569091 Bacteria Bacteria 237 7.210000000000001e-58   NTclustered gi|2546137838|emb|OY282420.1| 2569091 g31992 i0 81.373 210.906976744186 306 44 100 12 1 301 989741 990038 MAG: uncultured Bryobacterales bacterium isolate 78526416-339a-45b8-a6d3-8fabb82c2801 genome assembly, chromosome: 1 blastn 63483 237 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Bryobacterales     uncultured Bryobacterales bacterium
26990246 26990246 PRJNA792582_P_NODE_53582_length_247_cov_0.885057_g52768_i0 PRJNA792582 53582 247 0.885057 2.18609079 Thermoanaerobaculia bacterium 2651171 Bacteria Bacteria 46.6 0.00173   NR HEV2855820.1 2651171 g52768 i0 42.6 0.57085020242915 47 27 57.1 0 53 193 349 395 HEV2855820.1 IPT/TIG domain-containing protein [Thermoanaerobaculia bacterium] diamond 141 46.6 1 Bacteria   Pseudomonadati Acidobacteriota Thermoanaerobaculia       Thermoanaerobaculia bacterium
27370146 27370146 PRJNA792582_P_NODE_46263_length_260_cov_2.754011_g45449_i0 PRJNA792582 46263 260 2.754011 7.1604286 Bryobacteraceae bacterium 2212468 Bacteria Bacteria 147 2.75e-40   NR HYI92671.1 2212468 g45449 i0 77.6 0.980769230769231 85 19 98.1 0 259 5 220 304 HYI92671.1 hypothetical protein [Bryobacteraceae bacterium] diamond 255 147 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Bryobacterales Bryobacteraceae   Bryobacteraceae bacterium
27464734 27464734 PRJNA792582_P_NODE_50863_length_250_cov_0.870056_g50049_i0 PRJNA792582 50863 250 0.870056 2.17514 Acidobacteriota bacterium 1978231 Bacteria Bacteria 168 1.83e-49   NR MBP6823786.1 1978231 g50049 i0 96.4 1.992 83 3 99.6 0 249 1 34 116 MBP6823786.1 3-phosphoserine/phosphohydroxythreonine transaminase [Acidobacteriota bacterium] diamond 498 168 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
29106526 29106526 PRJNA792582_P_NODE_46288_length_260_cov_2.278075_g45474_i0 PRJNA792582 46288 260 2.278075 5.922995 Acidobacteriota bacterium 1978231 Bacteria Bacteria 42.7 0.0431   NR MCI0407439.1 1978231 g45474 i0 36.5 0.726923076923077 63 37 72.7 2 17 205 39 98 MCI0407439.1 acyl-CoA desaturase [Acidobacteriota bacterium] diamond 189 42.7 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
29169731 29169731 PRJNA792582_P_NODE_49429_length_251_cov_1.730337_g48615_i0 PRJNA792582 49429 251 1.730337 4.34314587 Acidobacteriota bacterium 1978231 Bacteria Bacteria 158 2.87e-46   NR HCG37378.1 1978231 g48615 i0 100 0.99203187250996006 83 0 99.2 0 250 2 46 128 HCG37378.1 hypothetical protein [Acidobacteriota bacterium] diamond 249 158 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
29359080 29359080 PRJNA792582_P_NODE_23609_length_355_cov_1.088652_g22795_i0 PRJNA792582 23609 355 1.088652 3.8647146 Acidobacteriota bacterium 1978231 Bacteria Bacteria 61.2 4.31e-8   NR MBX3294083.1 1978231 g22795 i0 45.6 0.667605633802817 79 42 66.8 1 354 118 424 501 MBX3294083.1 hypothetical protein [Acidobacteriota bacterium] diamond 237 61.2 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
29800950 29800950 PRJNA792582_P_NODE_50631_length_250_cov_1.152542_g49817_i0 PRJNA792582 50631 250 1.152542 2.881355 Pyrinomonadaceae bacterium 2283092 Bacteria Bacteria 69.3 1.76e-11   NR HSK74762.1 2283092 g49817 i0 42 2.532 81 45 94.8 1 244 8 356 436 HSK74762.1 hypothetical protein [Pyrinomonadaceae bacterium] diamond 633 69.3 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia Blastocatellales Pyrinomonadaceae   Pyrinomonadaceae bacterium
29927590 29927590 PRJNA792582_P_NODE_40451_length_276_cov_2.492611_g39637_i0 PRJNA792582 40451 276 2.492611 6.87960636 Granulicella mallensis 940614 Bacteria Bacteria 45.1 0.00817   NR WP_014263320.1 940614 g39637 i0 34.8 0.75 69 43 73.9 2 247 44 206 273 WP_014263320.1 glycoside hydrolase family 28 protein [Granulicella mallensis] diamond 207 45.1 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Terriglobales Acidobacteriaceae Granulicella Granulicella mallensis
31042768 31042768 PRJNA792582_P_NODE_35475_length_289_cov_4.115741_g34661_i0 PRJNA792582 35475 289 4.115741 11.89449149 Bacteria 2 Bacteria Bacteria 43.5 0.0338   NR PYQ27580.1 1978231 g34661 i0 28.9 1.57785467128028 76 40 64.4 2 246 61 211 286 PYQ27580.1 MAG: hypothetical protein DMF56_19565 [Acidobacteriota bacterium] diamond 456 43.5 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
31127641 31127641 PRJNA792582_P_NODE_42155_length_272_cov_1.512563_g41341_i0 PRJNA792582 42155 272 1.512563 4.11417136 Acidobacteriaceae bacterium 2052142 Bacteria Bacteria 46.6 0.00219   NR HEV2646267.1 2052142 g41341 i0 40 0.716911764705882 65 32 68.4 3 247 62 41 101 HEV2646267.1 M48 family metallopeptidase [Acidobacteriaceae bacterium] diamond 195 46.6 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Terriglobales Acidobacteriaceae   Acidobacteriaceae bacterium
31254407 31254407 PRJNA792582_P_NODE_55715_length_245_cov_0.895349_g54901_i0 PRJNA792582 55715 245 0.895349 2.19360505 Terriglobia bacterium 2081523 Bacteria Bacteria 89.7 1.45e-19   NR MDD5542077.1 2081523 g54901 i0 58 2.97551020408163 81 34 99.2 0 2 244 123 203 MDD5542077.1 FTR1 family protein [Terriglobia bacterium] diamond 729 89.7 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia       Terriglobia bacterium
31507667 31507667 PRJNA792582_P_NODE_22456_length_364_cov_0.790378_g21642_i0 PRJNA792582 22456 364 0.790378 2.87697592 Vicinamibacterales bacterium 2910147 Bacteria Bacteria 45.4 0.0146   NR HZR24276.1 2910147 g21642 i0 48.6 0.288461538461538 35 18 28.8 0 326 222 137 171 HZR24276.1 radical SAM protein [Vicinamibacterales bacterium] diamond 105 45.4 1 Bacteria   Pseudomonadati Acidobacteriota Vicinamibacteria Vicinamibacterales     Vicinamibacterales bacterium
31539247 31539247 PRJNA792582_P_NODE_50536_length_250_cov_1.451977_g49722_i0 PRJNA792582 50536 250 1.451977 3.6299425 Acidobacteriaceae bacterium 2052142 Bacteria Bacteria 92.8 9.9e-20   NR MEO6966032.1 2052142 g49722 i0 58.5 0.984 82 33 98.4 1 246 1 62 142 MEO6966032.1 DUF6259 domain-containing protein [Acidobacteriaceae bacterium] diamond 246 92.8 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Terriglobales Acidobacteriaceae   Acidobacteriaceae bacterium
32076924 32076924 PRJNA792582_P_NODE_45538_length_263_cov_0.910526_g44724_i0 PRJNA792582 45538 263 0.910526 2.39468338 Pyrinomonadaceae bacterium 2283092 Bacteria Bacteria 42.4 0.0493   NR MFN2578657.1 2283092 g44724 i0 40.5 0.422053231939163 37 22 42.2 0 188 78 34 70 MFN2578657.1 DUF2585 family protein [Pyrinomonadaceae bacterium] diamond 111 42.4 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia Blastocatellales Pyrinomonadaceae   Pyrinomonadaceae bacterium
32307882 32307882 PRJNA792582_P_NODE_25219_length_344_cov_1.446494_g24405_i0 PRJNA792582 25219 344 1.446494 4.97593936 Acidobacteriota 57723 Bacteria Bacteria 105 5.85e-24   NR WP_415199918.1 1964179 g24405 i0 76.8 2.45058139534884 69 16 60.2 0 207 1 9 77 WP_415199918.1 IMP dehydrogenase [Silvibacterium sp.] diamond 843 105 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Terriglobales Acidobacteriaceae Silvibacterium Silvibacterium sp.
32551801 32551801 PRJNA792582_P_NODE_47039_length_258_cov_2.059459_g46225_i0 PRJNA792582 47039 258 2.059459 5.31340422 Acidobacteriota bacterium 1978231 Bacteria Bacteria 44.7 0.00878   NR MBU6240550.1 1978231 g46225 i0 62.1 0.337209302325581 29 11 33.7 0 232 146 254 282 MBU6240550.1 molybdopterin-dependent oxidoreductase [Acidobacteriota bacterium] diamond 87 44.7 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;