RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA792582", tax_kingdom = "Fungi" and tax_phylum = "Chytridiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Chytridiomycota · 3 ✖

tax_kingdom 1

  • Fungi · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA792582 · 3 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27252524 27252524 PRJNA792582_P_NODE_56403_length_244_cov_0.900585_g55589_i0 PRJNA792582 56403 244 0.900585 2.1974274 Fungi 4751 Fungi Fungi 64.3 9.42e-10   NR KAJ3394834.1 109889 g55589 i0 51.8 3.50409836065574 56 24 68.9 1 234 67 70 122 KAJ3394834.1 Eukaryotic translation initiation factor eIF-1 [Lobulomyces angularis] diamond 855 64.3 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Lobulomycetales Lobulomycetaceae Lobulomyces Lobulomyces angularis
28547520 28547520 PRJNA792582_P_NODE_34587_length_292_cov_2.648402_g33773_i0 PRJNA792582 34587 292 2.648402 7.73333384 Opisthokonta 33154 Fungi Fungi 81.6 8.47e-17   NR KAJ3040892.1 64517 g33773 i0 60 3.86301369863014 70 28 71.9 0 83 292 88 157 KAJ3040892.1 Histone H2B type 1-A [Rhizophlyctis rosea] diamond 1128 81.6 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Rhizophlyctidales Rhizophlyctidaceae Rhizophlyctis Rhizophlyctis rosea
32393346 32393346 PRJNA792582_P_NODE_46219_length_261_cov_0.872340_g45405_i0 PRJNA792582 46219 261 0.87234 2.2768074 Piromyces sp. E2 73868 Fungi Fungi 76.6 4.96e-14   NR OUM60653.1 73868 g45405 i0 54.2 1.28735632183908 59 27 67.8 0 186 10 1 59 OUM60653.1 hypothetical protein PIROE2DRAFT_13559 [Piromyces sp. E2] diamond 336 76.6 1 Eukaryota Opisthokonta Fungi Chytridiomycota Neocallimastigomycetes Neocallimastigales Neocallimastigaceae Piromyces Piromyces sp. E2

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;