contig_metadata
6 rows where bioproject = "PRJNA792582", tax_clade = "Sar" and tax_phylum = "Bacillariophyta"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 2052852 | 2052852 | PRJNA792582_P_NODE_33602_length_297_cov_2.062500_g32788_i0 | PRJNA792582 | 33602 | 297 | 2.0625 | 6.125625 | Durinskia baltica diatom endosymbiont | 1079368 | SAR_Eukaryotes | SAR_Eukaryotes | 158 | 5.68e-34 | NTclustered | gi|347800972|gb|JN378735.1| | 1079368 | g32788 | i0 | 90.756 | 39.952861952862 | 119 | 9 | 40 | 2 | 102 | 220 | 34471 | 34587 | Endosymbiont of Durinskia baltica mitochondrion, partial genome | blastn | 11866 | 158 | 1 | Eukaryota | Sar | Bacillariophyta | Bacillariophyceae | Durinskia baltica diatom endosymbiont | |||||
| 14805736 | 14805736 | PRJNA792582_P_NODE_54672_length_246_cov_0.890173_g53858_i0 | PRJNA792582 | 54672 | 246 | 0.890173 | 2.18982558 | Lithodesmioides sp. mgcode 4 | 2914905 | SAR_Eukaryotes | SAR_Eukaryotes | 246 | 9.5e-61 | NTclustered | gi|2073953334|gb|MW849271.1| | 2914905 | g53858 | i0 | 85.957 | 55.8780487804878 | 235 | 28 | 95 | 4 | 13 | 245 | 7723 | 7954 | Lithodesmioides sp. mgcode 4 isolate Qingdao in China mitochondrion, complete genome | blastn | 13746 | 246 | 1 | Eukaryota | Sar | Bacillariophyta | Mediophyceae | Lithodesmiales | Lithodesmiaceae | Lithodesmioides | Lithodesmioides sp. mgcode 4 | ||
| 29620332 | 29620332 | PRJNA792582_P_NODE_58030_length_242_cov_1.751479_g57216_i0 | PRJNA792582 | 58030 | 242 | 1.751479 | 4.23857918 | Coscinodiscales | 216785 | SAR_Eukaryotes | SAR_Eukaryotes | 100 | 2.42e-25 | NR | YP_010248469.1 | 265552 | g57216 | i0 | 65 | 2.9504132231405 | 80 | 28 | 99.2 | 0 | 2 | 241 | 9 | 88 | YP_010248469.1 ribosomal protein S12 [Coscinodiscus granii] | diamond | 714 | 100 | 1 | Eukaryota | Sar | Bacillariophyta | Coscinodiscophyceae | Coscinodiscales | Coscinodiscaceae | Coscinodiscus | Coscinodiscus granii | ||
| 30789622 | 30789622 | PRJNA792582_P_NODE_41034_length_275_cov_1.301980_g40220_i0 | PRJNA792582 | 41034 | 275 | 1.30198 | 3.580445 | Coscinodiscophyceae | 33836 | SAR_Eukaryotes | SAR_Eukaryotes | 46.6 | 0.00251 | NR | KAL3778774.1 | 29204 | g40220 | i0 | 54.5 | 1.59272727272727 | 33 | 14 | 36 | 1 | 176 | 78 | 402 | 433 | KAL3778774.1 hypothetical protein HJC23_002680 [Cyclotella cryptica] | diamond | 438 | 46.6 | 1 | Eukaryota | Sar | Bacillariophyta | Coscinodiscophyceae | Stephanodiscales | Stephanodiscaceae | Cyclotella | Cyclotella cryptica | ||
| 32117848 | 32117848 | PRJNA792582_P_NODE_57718_length_243_cov_0.905882_g56904_i0 | PRJNA792582 | 57718 | 243 | 0.905882 | 2.20129326 | Bacillariophyta | 2836 | SAR_Eukaryotes | SAR_Eukaryotes | 108 | 3.45e-25 | NR | KAI2488800.1 | 210448 | g56904 | i0 | 75.4 | 4.01234567901235 | 65 | 16 | 80.2 | 0 | 242 | 48 | 750 | 814 | KAI2488800.1 hypothetical protein MHU86_25854 [Fragilaria crotonensis] | diamond | 975 | 108 | 1 | Eukaryota | Sar | Bacillariophyta | Fragilariophyceae | Fragilariales | Fragilariaceae | Fragilaria | Fragilaria crotonensis | ||
| 32740675 | 32740675 | PRJNA792582_P_NODE_51740_length_249_cov_0.875000_g50926_i0 | PRJNA792582 | 51740 | 249 | 0.875 | 2.17875 | Phaeodactylum tricornutum CCAP 1 | 2850 | SAR_Eukaryotes | SAR_Eukaryotes | 108 | 2.05e-25 | NR | XP_002181230.1 | 556484 | g50926 | i0 | 65 | 0.963855421686747 | 80 | 28 | 96.4 | 0 | 247 | 8 | 1960 | 2039 | XP_002181230.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1] | diamond | 240 | 108 | 1 | Eukaryota | Sar | Bacillariophyta | Bacillariophyceae | Naviculales | Phaeodactylaceae | Phaeodactylum | Phaeodactylum tricornutum |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;