RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA792582", tax_clade = "Sar" and tax_phylum = "Apicomplexa"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Apicomplexa · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA792582 · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
25003472 25003472 PRJNA792582_P_NODE_41040_length_275_cov_1.287129_g40226_i0 PRJNA792582 41040 275 1.287129 3.53960475 Eimeria acervulina 5801 SAR_Eukaryotes SAR_Eukaryotes 56.5 0.002   NTclustered gi|914996325|ref|XM_013391468.1| 5801 g40226 i0 100 2.98545454545455 30 0 11 0 207 236 101 130 Eimeria acervulina hypothetical protein, conserved partial mRNA blastn 821 56.5 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria acervulina
30116850 30116850 PRJNA792582_P_NODE_60792_length_227_cov_2.129870_g59978_i0 PRJNA792582 60792 227 2.12987 4.8348049 Plasmodium ovale wallikeri 864142 SAR_Eukaryotes SAR_Eukaryotes 50.8 4.25e-5   NR SBT42515.1 864142 g59978 i0 37.7 0.700440528634361 53 33 70 0 46 204 353 405 SBT42515.1 hypothetical protein POVWA1_046090 [Plasmodium ovale wallikeri] diamond 159 50.8 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium ovale

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;