RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA792582", tax_clade = "Amoebozoa" and tax_phylum = "Discosea"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Discosea · 2 ✖

tax_clade 1

  • Amoebozoa · 2 ✖

bioproject 1

  • PRJNA792582 · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5880219 5880219 PRJNA792582_P_NODE_11425_length_504_cov_4.856148_g10615_i0 PRJNA792582 11425 504 4.856148 24.47498592 Vannella sp. strain CAZ6/I 325077 Discosea other_Eukaryota 782 0   NTclustered gi|62865939|gb|AY929914.1| 325077 g10615 i0 94.882 100.789682539683 508 12 100 11 1 504 12 509 Vannella sp. strain CAZ6/I 18S small subunit ribosomal RNA gene, partial sequence blastn 50798 782 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Vannella Vannella sp. strain CAZ6/I
32140240 32140240 PRJNA792582_P_NODE_51938_length_249_cov_0.875000_g51124_i0 PRJNA792582 51938 249 0.875 2.17875 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 63.9 1.33e-9   NR XP_004348346.1 1257118 g51124 i0 53.2 0.566265060240964 47 22 56.6 0 190 50 209 255 XP_004348346.1 uncharacterized protein ACA1_325440 [Acanthamoeba castellanii str. Neff] diamond 141 63.9 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;