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contig_metadata

30 rows where bioproject = "PRJNA789095" and tax_phylum = "Nematoda"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Nematoda · 30 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA789095 · 30 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
771774 771774 PRJNA789095_P_NODE_79501_length_226_cov_4.555556_g78167_i0 PRJNA789095 79501 226 4.555556 10.29555656 Caenorhabditis auriculariae 2777116 Nematoda Nematoda 111 2.24e-29   NR CAD6188592.1 2777116 g78167 i0 94.8 4.6858407079646 58 3 77 0 175 2 11 68 CAD6188592.1 unnamed protein product [Caenorhabditis auriculariae] diamond 1059 111 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Caenorhabditis Caenorhabditis auriculariae
2045996 2045996 PRJNA789095_P_NODE_22342_length_494_cov_1.000000_g21013_i0 PRJNA789095 22342 494 1 4.94 Toxocara canis 6265 Nematoda Nematoda 238 4.13e-75   NR KHN73353.1 6265 g21013 i0 97.4 0.917004048582996 151 4 91.7 0 488 36 42 192 KHN73353.1 Cuticle collagen dpy-5 [Toxocara canis] diamond 453 238 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Toxocaridae Toxocara Toxocara canis
3321480 3321480 PRJNA789095_P_NODE_27323_length_418_cov_1.278261_g25991_i0 PRJNA789095 27323 418 1.278261 5.34313098 Anisakis simplex 6269 Nematoda Nematoda 171 4.92e-52   NR VDK19531.1 6269 g25991 i0 84.3 4.11961722488038 134 21 96.2 0 12 413 1 134 VDK19531.1 unnamed protein product [Anisakis simplex] diamond 1722 171 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Anisakidae Anisakis Anisakis simplex
3322962 3322962 PRJNA789095_P_NODE_77543_length_234_cov_4.037267_g76209_i0 PRJNA789095 77543 234 4.037267 9.44720478 Strongyloides papillosus 174720 Nematoda Nematoda 52.8 0.021   NTclustered gi|687022798|emb|LM525910.1| 174720 g76209 i0 96.774 0.132478632478632 31 1 13 0 76 106 3513 3483 Strongyloides papillosus genome assembly S_papillosus_LIN ,scaffold SPAL_contig0000283 blastn 31 52.8 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Strongyloididae Strongyloides Strongyloides papillosus
7150274 7150274 PRJNA789095_P_NODE_79206_length_227_cov_11.779221_g77872_i0 PRJNA789095 79206 227 11.779221 26.73883167 Metazoa 33208 Nematoda Nematoda 157 6.199999999999999e-46   NR CDJ85110.1 6289 g77872 i0 86.7 14.8678414096916 75 10 99.1 0 227 3 2 76 CDJ85110.1 Glutamine synthetase domain containing protein, partial [Haemonchus contortus] diamond 3375 157 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Trichostrongylidae Haemonchus Haemonchus contortus
8424521 8424521 PRJNA789095_P_NODE_67007_length_250_cov_0.870056_g65673_i0 PRJNA789095 67007 250 0.870056 2.17514 Toxocara canis 6265 Nematoda Nematoda 168 3.4999999999999998e-46   NR KHN72307.1 6265 g65673 i0 97.6 4.968 83 2 99.6 0 1 249 555 637 KHN72307.1 putative methylmalonyl-CoA mutase, mitochondrial [Toxocara canis] diamond 1242 168 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Toxocaridae Toxocara Toxocara canis
21173950 21173950 PRJNA789095_P_NODE_67877_length_249_cov_0.875000_g66543_i0 PRJNA789095 67877 249 0.875 2.17875 Toxocara canis 6265 Nematoda Nematoda 146 1.5e-38   NR VDM43841.1 6265 g66543 i0 81.3 3.21686746987952 91 9 100 1 249 1 641 731 VDM43841.1 unnamed protein product [Toxocara canis] diamond 801 146 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Toxocaridae Toxocara Toxocara canis
26841655 26841655 PRJNA789095_P_NODE_66881_length_250_cov_0.870056_g65547_i0 PRJNA789095 66881 250 0.870056 2.17514 Rhabditida 6236 Nematoda Nematoda 134 5.82e-36   NR P28316.2 6253 g65547 i0 70.7 4.92 82 24 98.4 0 248 3 60 141 P28316.2 RecName: Full=Extracellular globin; Flags: Precursor [Ascaris suum] diamond 1230 135 0.992592592592593 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Ascarididae Ascaris Ascaris suum
27022137 27022137 PRJNA789095_P_NODE_25302_length_444_cov_1.245283_g23970_i0 PRJNA789095 25302 444 1.245283 5.52905652 Toxocara canis 6265 Nematoda Nematoda 92.8 6.95e-20   NR KHN84499.1 6265 g23970 i0 38 0.72972972972973 108 66 73 1 118 441 20 126 KHN84499.1 hypothetical protein Tcan_03041 [Toxocara canis] diamond 324 92.8 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Toxocaridae Toxocara Toxocara canis
27053809 27053809 PRJNA789095_P_NODE_73722_length_243_cov_0.905882_g72388_i0 PRJNA789095 73722 243 0.905882 2.20129326 Toxocara canis 6265 Nematoda Nematoda 162 4.67e-44   NR KHN71877.1 6265 g72388 i0 92.6 2 81 6 100 0 243 1 1290 1370 KHN71877.1 Transient receptor potential channel [Toxocara canis] diamond 486 162 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Toxocaridae Toxocara Toxocara canis
27053810 27053810 PRJNA789095_P_NODE_74702_length_242_cov_0.911243_g73368_i0 PRJNA789095 74702 242 0.911243 2.20520806 Toxocara canis 6265 Nematoda Nematoda 142 2.09e-40   NR VDM39937.1 6265 g73368 i0 83.5 1.95867768595041 79 13 97.9 0 3 239 69 147 VDM39937.1 unnamed protein product [Toxocara canis] diamond 474 142 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Toxocaridae Toxocara Toxocara canis
27243366 27243366 PRJNA789095_P_NODE_60163_length_263_cov_1.621053_g58829_i0 PRJNA789095 60163 263 1.621053 4.26336939 Toxocara canis 6265 Nematoda Nematoda 60.1 4.83e-9   NR KHN82277.1 6265 g58829 i0 38.4 0.832699619771863 73 40 83.3 1 262 44 53 120 KHN82277.1 hypothetical protein Tcan_02775 [Toxocara canis] diamond 219 60.1 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Toxocaridae Toxocara Toxocara canis
27275007 27275007 PRJNA789095_P_NODE_15603_length_680_cov_5.568369_g14309_i0 PRJNA789095 15603 680 5.568369 37.8649092 Necator americanus 51031 Nematoda Nematoda 84.7 2.56e-16   NR XP_064067193.1 51031 g14309 i0 47.6 0.701470588235294 82 43 36.2 0 291 46 5 86 XP_064067193.1 hypothetical protein RB195_023773 [Necator americanus] diamond 477 84.7 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Ancylostomatidae Necator Necator americanus
27284218 27284218 PRJNA789095_P_NODE_69463_length_247_cov_2.074713_g68129_i0 PRJNA789095 69463 247 2.074713 5.12454111 Trichinella 6333 Nematoda Nematoda 95.9 1.89e-21   NR KAL1227627.1 6334 g68129 i0 53.8 14.6477732793522 80 37 97.2 0 242 3 62 141 KAL1227627.1 Transmembrane protein [Trichinella spiralis] diamond 3618 95.9 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Trichinellidae Trichinella Trichinella spiralis
27906302 27906302 PRJNA789095_P_NODE_45165_length_299_cov_1.256637_g43831_i0 PRJNA789095 45165 299 1.256637 3.75734463 Anisakis simplex 6269 Nematoda Nematoda 128 9.06e-35   NR VDK58352.1 6269 g43831 i0 93.2 0.591973244147157 59 4 59.2 0 298 122 37 95 VDK58352.1 unnamed protein product, partial [Anisakis simplex] diamond 177 128 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Anisakidae Anisakis Anisakis simplex
28159400 28159400 PRJNA789095_P_NODE_72065_length_245_cov_0.895349_g70731_i0 PRJNA789095 72065 245 0.895349 2.19360505 Bursaphelenchus okinawaensis 465554 Nematoda Nematoda 85.1 4.65e-17   NR CAD5217075.1 465554 g70731 i0 50.6 0.991836734693878 81 38 98 2 243 4 658 737 CAD5217075.1 unnamed protein product [Bursaphelenchus okinawaensis] diamond 243 85.1 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Aphelenchoididae Bursaphelenchus Bursaphelenchus okinawaensis
28831337 28831337 PRJNA789095_P_NODE_31428_length_374_cov_10.634551_g30095_i0 PRJNA789095 31428 374 10.634551 39.77322074 Metazoa 33208 Nematoda Nematoda 197 7.13e-61   NR XP_003368803.1 6334 g30095 i0 84.5 9.28877005347594 116 18 93 0 372 25 120 235 XP_003368803.1 eukaryotic translation initiation factor 2 subunit 3, partial [Trichinella spiralis] diamond 3474 197 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Trichinellidae Trichinella Trichinella spiralis
28853593 28853593 PRJNA789095_P_NODE_30268_length_386_cov_0.837061_g28935_i0 PRJNA789095 30268 386 0.837061 3.23105546 Pseudoterranova decipiens 6271 Nematoda Nematoda 89.4 2.98e-18   NR CAA77743.1 6271 g28935 i0 55.2 0.520725388601036 67 28 50.5 1 386 192 250 316 CAA77743.1 hemoglobin [Pseudoterranova decipiens] diamond 201 89.4 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Anisakidae Pseudoterranova Pseudoterranova decipiens
29642805 29642805 PRJNA789095_P_NODE_67250_length_250_cov_0.870056_g65916_i0 PRJNA789095 67250 250 0.870056 2.17514 Toxocara canis 6265 Nematoda Nematoda 84.7 6.91e-17   NR VDM39320.1 6265 g65916 i0 46.4 2.016 84 44 99.6 1 250 2 761 844 VDM39320.1 unnamed protein product [Toxocara canis] diamond 504 84.7 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Toxocaridae Toxocara Toxocara canis
29642807 29642807 PRJNA789095_P_NODE_71150_length_246_cov_0.838150_g69816_i0 PRJNA789095 71150 246 0.83815 2.061849 Strongyloides ratti 34506 Nematoda Nematoda 52.8 1.16e-5   NR XP_024499137.1 34506 g69816 i0 40.3 0.939024390243902 77 46 93.9 0 243 13 447 523 XP_024499137.1 Hypoxia up-regulated protein 1 [Strongyloides ratti] diamond 231 52.8 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Strongyloididae Strongyloides Strongyloides ratti
29958935 29958935 PRJNA789095_P_NODE_69111_length_248_cov_0.880000_g67777_i0 PRJNA789095 69111 248 0.88 2.1824 Enterobius vermicularis 51028 Nematoda Nematoda 65.1 2.93e-11   NR VDD91667.1 51028 g67777 i0 57.1 0.762096774193548 63 27 76.2 0 21 209 24 86 VDD91667.1 unnamed protein product [Enterobius vermicularis] diamond 189 65.1 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Oxyuridae Enterobius Enterobius vermicularis
30148302 30148302 PRJNA789095_P_NODE_50612_length_284_cov_2.189573_g49278_i0 PRJNA789095 50612 284 2.189573 6.21838732 Anisakis simplex 6269 Nematoda Nematoda 135 1.32e-35   NR VDK60068.1 6269 g49278 i0 80.2 0.908450704225352 86 17 90.8 0 26 283 4 89 VDK60068.1 unnamed protein product [Anisakis simplex] diamond 258 135 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Anisakidae Anisakis Anisakis simplex
30148304 30148304 PRJNA789095_P_NODE_67012_length_250_cov_0.870056_g65678_i0 PRJNA789095 67012 250 0.870056 2.17514 Toxocara canis 6265 Nematoda Nematoda 108 5.14e-26   NR VDM44009.1 6265 g65678 i0 72.5 1.656 69 18 82.8 1 43 249 1 68 VDM44009.1 unnamed protein product [Toxocara canis] diamond 414 108 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Toxocaridae Toxocara Toxocara canis
30243422 30243422 PRJNA789095_P_NODE_74732_length_242_cov_0.911243_g73398_i0 PRJNA789095 74732 242 0.911243 2.20520806 Ancylostoma duodenale 51022 Nematoda Nematoda 51.6 1.36e-6   NR KIH46370.1 51022 g73398 i0 62.5 1.98347107438017 40 15 49.6 0 1 120 24 63 KIH46370.1 hypothetical protein ANCDUO_23579 [Ancylostoma duodenale] diamond 480 51.6 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Ancylostomatidae Ancylostoma Ancylostoma duodenale
30306994 30306994 PRJNA789095_P_NODE_40132_length_315_cov_1.272727_g38798_i0 PRJNA789095 40132 315 1.272727 4.00909005 Anisakis simplex 6269 Nematoda Nematoda 157 3.72e-42   NR VDK51989.1 6269 g38798 i0 70.2 0.990476190476191 104 31 99 0 314 3 901 1004 VDK51989.1 unnamed protein product [Anisakis simplex] diamond 312 157 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Anisakidae Anisakis Anisakis simplex
31096289 31096289 PRJNA789095_P_NODE_74715_length_242_cov_0.911243_g73381_i0 PRJNA789095 74715 242 0.911243 2.20520806 Ascaris suum 6253 Nematoda Nematoda 84.7 4.51e-19   NR BAD24819.1 6253 g73381 i0 88.6 1.09090909090909 44 5 54.5 0 242 111 72 115 BAD24819.1 macrophage migration inhibitory factor [Ascaris suum] diamond 264 84.7 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Ascarididae Ascaris Ascaris suum
31349428 31349428 PRJNA789095_P_NODE_66236_length_251_cov_0.865169_g64902_i0 PRJNA789095 66236 251 0.865169 2.17157419 Anisakis simplex 6269 Nematoda Nematoda 58.9 8.27e-8   NR VDK55535.1 6269 g64902 i0 72.5 0.609561752988048 51 9 55 1 250 113 217 267 VDK55535.1 unnamed protein product [Anisakis simplex] diamond 153 58.9 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Anisakidae Anisakis Anisakis simplex
31728738 31728738 PRJNA789095_P_NODE_40157_length_315_cov_0.838843_g38823_i0 PRJNA789095 40157 315 0.838843 2.64235545 Toxocara canis 6265 Nematoda Nematoda 110 2.9400000000000004e-27   NR KHN84499.1 6265 g38823 i0 45.9 1.86666666666667 98 52 93.3 1 313 20 93 189 KHN84499.1 hypothetical protein Tcan_03041 [Toxocara canis] diamond 588 110 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Toxocaridae Toxocara Toxocara canis
31918666 31918666 PRJNA789095_P_NODE_74797_length_242_cov_0.911243_g73463_i0 PRJNA789095 74797 242 0.911243 2.20520806 Toxocara canis 6265 Nematoda Nematoda 139 1.05e-36   NR KHN88091.1 6265 g73463 i0 80.8 0.966942148760331 78 15 96.7 0 7 240 427 504 KHN88091.1 4-hydroxybutyrate coenzyme A transferase [Toxocara canis] diamond 234 139 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Toxocaridae Toxocara Toxocara canis
32520102 32520102 PRJNA789095_P_NODE_71919_length_245_cov_0.895349_g70585_i0 PRJNA789095 71919 245 0.895349 2.19360505 Toxocara canis 6265 Nematoda Nematoda 115 6.97e-28   NR VDM38670.1 6265 g70585 i0 71.4 0.942857142857143 77 21 94.3 1 243 13 211 286 VDM38670.1 unnamed protein product [Toxocara canis] diamond 231 115 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Toxocaridae Toxocara Toxocara canis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;