RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA789095", tax_phylum = "Negarnaviricota" and tax_superkingdom = "Viruses"

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analysis 2

tax_superkingdom 1

  • Viruses · 3 ✖

tax_phylum 1

  • Negarnaviricota · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJNA789095 · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
16073875 16073875 PRJNA789095_P_NODE_64373_length_254_cov_1.243094_g63039_i0 PRJNA789095 64373 254 1.243094 3.15745876 brine shrimp yue-like virus 3 2900455 Viruses Viruses 464 2.4999999999999994e-126   NTclustered gi|2209094280|gb|OL472816.1| 2900455 g63039 i0 99.606 4 254 1 100 0 1 254 728 981 MAG: Brine shrimp yue-like virus 3 isolate 02/QH/92-02 segment 1 RNA-dependent RNA polymerase gene, complete cds blastn 1016 464 1 Viruses   Orthornavirae Negarnaviricota Yunchangviricetes Goujianvirales Yueviridae   brine shrimp yue-like virus 3
19896769 19896769 PRJNA789095_P_NODE_16496_length_646_cov_2.369983_g15190_i0 PRJNA789095 16496 646 2.369983 15.31009018 brine shrimp chuvirus 1 2900479 Viruses Viruses 97.1 2.93e-15   NTclustered gi|2177952885|gb|OL452274.1| 2900479 g15190 i0 91.429 0.541795665634675 70 6 11 0 577 646 7030 7099 MAG: Brine shrimp chuvirus 1 isolate YC/91, complete genome blastn 350 97.1 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Jingchuvirales Chuviridae   brine shrimp chuvirus 1
26610337 26610337 PRJNA789095_P_NODE_45481_length_298_cov_2.346667_g44147_i0 PRJNA789095 45481 298 2.346667 6.99306766 brine shrimp arlivirus 8 2900383 Viruses Viruses 104 5.229999999999999e-24   NR UNI74120.1 2900383 g44147 i0 60.5 0.815436241610738 81 32 81.5 0 3 245 279 359 UNI74120.1 MAG: hypothetical protein [brine shrimp arlivirus 8] diamond 243 104 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Lispiviridae Artemvirus Artemvirus bsaeighalis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;