RNAquarium Metadata Server
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contig_metadata

1 row where bioproject = "PRJNA789095" and tax_phylum = "Candidatus Omnitrophota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Omnitrophota · 1 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA789095 · 1 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
31222586 31222586 PRJNA789095_P_NODE_82255_length_196_cov_5.764228_g80921_i0 PRJNA789095 82255 196 5.764228 11.29788688 Candidatus Aceula lacicola 3041133 Bacteria Bacteria 44.3 0.0056   NR MDP8265113.1 3041133 g80921 i0 44.2 0.658163265306122 43 24 65.8 0 60 188 2 44 MDP8265113.1 ATP-dependent zinc metalloprotease FtsH [Candidatus Aceula lacicola] diamond 129 44.3 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota       Candidatus Aceula Candidatus Aceula lacicola

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;