RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

1 row where bioproject = "PRJNA789095" and tax_phylum = "Candidatus Kapaibacteriota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Candidatus Kapaibacteriota · 1 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA789095 · 1 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27748970 27748970 PRJNA789095_P_NODE_48644_length_289_cov_1.199074_g47310_i0 PRJNA789095 48644 289 1.199074 3.46532386 Candidatus Kapaibacterium sp. 2447898 Bacteria Bacteria 43.5 0.0316   NR HPO63991.1 2447898 g47310 i0 36.4 1.14186851211073 55 34 56.1 1 248 87 9 63 HPO63991.1 class I tRNA ligase family protein [Candidatus Kapaibacterium sp.] diamond 330 43.5 1 Bacteria FCB group Pseudomonadati Candidatus Kapaibacteriota Candidatus Kapaibacteriia Candidatus Kapaibacteriales Candidatus Kapaibacteriaceae Candidatus Kapaibacterium Candidatus Kapaibacterium sp.

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;