RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA789095", tax_kingdom = "Pseudomonadati" and tax_phylum = "Acidobacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Acidobacteriota · 2 ✖

tax_kingdom 1

  • Pseudomonadati · 2 ✖

bioproject 1

  • PRJNA789095 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27243368 27243368 PRJNA789095_P_NODE_66943_length_250_cov_0.870056_g65609_i0 PRJNA789095 66943 250 0.870056 2.17514 Blastocatellia bacterium 2052146 Bacteria Bacteria 112 1.7300000000000003e-27   NR HZF38455.1 2052146 g65609 i0 69.9 0.996 83 23 97.2 1 245 3 122 204 HZF38455.1 HipA domain-containing protein [Blastocatellia bacterium] diamond 249 112 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia       Blastocatellia bacterium
30243411 30243411 PRJNA789095_P_NODE_49872_length_286_cov_1.422535_g48538_i0 PRJNA789095 49872 286 1.422535 4.0684501 Thermoanaerobaculia bacterium 2651171 Bacteria Bacteria 43.1 0.0446   NR MFL6294111.1 2651171 g48538 i0 39.7 0.660839160839161 63 35 66.1 1 57 245 467 526 MFL6294111.1 accessory Sec system translocase SecA2 [Thermoanaerobaculia bacterium] diamond 189 43.1 1 Bacteria   Pseudomonadati Acidobacteriota Thermoanaerobaculia       Thermoanaerobaculia bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;