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contig_metadata

15 rows where bioproject = "PRJNA789095" and tax_clade = "core chlorophytes"

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analysis 2

tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • core chlorophytes · 15 ✖

bioproject 1

  • PRJNA789095 · 15 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2046568 2046568 PRJNA789095_P_NODE_41722_length_310_cov_3.468354_g40388_i0 PRJNA789095 41722 310 3.468354 10.7518974 Volvox carteri 3067 Plants Plants 52.8 0.029   NTclustered gi|302839028|ref|XM_002951026.1| 3068 g40388 i0 94.286 0.112903225806452 35 0 11 2 183 217 1435 1403 Volvox carteri f. nagariensis uncharacterized protein (VOLCADRAFT_91505), partial mRNA blastn 35 52.8 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Volvocaceae Volvox Volvox carteri
5042792 5042792 PRJNA789095_P_NODE_82224_length_196_cov_11.902439_g80890_i0 PRJNA789095 82224 196 11.902439 23.32878044 Desmochloris 138596 Plants Plants 351 1.49e-92   NTclustered gi|57864438|dbj|AB049416.2| 138176 g80890 i0 98.98 100 196 2 100 0 1 196 1423 1618 Desmochloris halophila gene for 18S rRNA blastn 19600 351 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Ulvophyceae Chlorocystidales Chlorocystidaceae Desmochloris Desmochloris halophila
7149998 7149998 PRJNA789095_P_NODE_70146_length_246_cov_10.323699_g68812_i0 PRJNA789095 70146 246 10.323699 25.39629954 Desmochloris halophila 138176 Plants Plants 405 1.48e-108   NTclustered gi|371782123|emb|HE610155.1| 138176 g68812 i0 96.341 112.40243902439 246 9 100 0 1 246 2927 2682 Desmochloris halophila plastid 16S rRNA gene (partial), 23S rRNA gene (partial) and ITS1, strain UTEX 2073 blastn 27651 405 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Ulvophyceae Chlorocystidales Chlorocystidaceae Desmochloris Desmochloris halophila
8423057 8423057 PRJNA789095_P_NODE_16507_length_645_cov_9.110140_g15201_i0 PRJNA789095 16507 645 9.11014 58.760403 Desmochloris halophila 138176 Plants Plants 1133 0   NTclustered gi|371782123|emb|HE610155.1| 138176 g15201 i0 98.445 123.57519379845 643 10 99 0 1 643 3271 3913 Desmochloris halophila plastid 16S rRNA gene (partial), 23S rRNA gene (partial) and ITS1, strain UTEX 2073 blastn 79706 1133 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Ulvophyceae Chlorocystidales Chlorocystidaceae Desmochloris Desmochloris halophila
8867616 8867616 PRJNA789095_P_NODE_50287_length_285_cov_1.443396_g48953_i0 PRJNA789095 50287 285 1.443396 4.1136786 Ulva 3118 Plants Plants 320 6.54e-83   NTclustered gi|1605131061|gb|MH763013.1| 63410 g48953 i0 87.108 43.5649122807018 287 32 100 5 1 285 31598 31315 Ulva lactuca voucher L0054996 mitochondrion, partial genome blastn 12416 320 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Ulvophyceae Ulvales Ulvaceae Ulva Ulva lactuca
9698427 9698427 PRJNA789095_P_NODE_24808_length_451_cov_3.642857_g23476_i0 PRJNA789095 24808 451 3.642857 16.42928507 Chlamydomonas reinhardtii 3055 Plants Plants 58.4 0.001   NTclustered gi|2082259816|ref|XM_043068258.1| 3055 g23476 i0 97.059 0.148558758314856 34 1 8 0 21 54 3302 3335 Chlamydomonas reinhardtii uncharacterized protein (CHLRE_12g512650v5), mRNA blastn 67 58.4 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
12249783 12249783 PRJNA789095_P_NODE_28670_length_403_cov_0.933333_g27338_i0 PRJNA789095 28670 403 0.933333 3.76133199 Pedinophyceae sp. YPF-7 765719 Plants Plants 157 3.1799999999999998e-46   NR CAG9462620.1 765719 g27338 i0 69.1 7.08684863523573 123 36 90.1 2 401 39 22 144 CAG9462620.1 unnamed protein product [Pedinophyceae sp. YPF-701] diamond 2856 157 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Pedinophyceae       Pedinophyceae sp. YPF-701
13523838 13523838 PRJNA789095_P_NODE_23551_length_471_cov_5.864322_g22221_i0 PRJNA789095 23551 471 5.864322 27.62095662 Desmochloris halophila 138176 Plants Plants 848 0   NTclustered gi|371782123|emb|HE610155.1| 138176 g22221 i0 99.153 122.070063694268 472 3 100 1 1 471 2581 2110 Desmochloris halophila plastid 16S rRNA gene (partial), 23S rRNA gene (partial) and ITS1, strain UTEX 2073 blastn 57495 848 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Ulvophyceae Chlorocystidales Chlorocystidaceae Desmochloris Desmochloris halophila
13525009 13525009 PRJNA789095_P_NODE_62551_length_257_cov_12.625000_g61217_i0 PRJNA789095 62551 257 12.625 32.44625 Desmochloris halophila 138176 Plants Plants 464 2.5299999999999998e-126   NTclustered gi|371782086|emb|HE610118.1| 138176 g61217 i0 99.222 100.003891050584 257 2 100 0 1 257 1653 1909 Desmochloris halophila 18S rRNA gene (partial), 5.8S rRNA gene, 28S rRNA gene (partial), ITS1 and ITS2, strain UTEX 2073 blastn 25701 464 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Ulvophyceae Chlorocystidales Chlorocystidaceae Desmochloris Desmochloris halophila
17792257 17792257 PRJNA789095_P_NODE_82294_length_196_cov_4.308943_g80960_i0 PRJNA789095 82294 196 4.308943 8.44552828 Ulvales 3113 Plants Plants 167 5.8e-37   NTclustered gi|2664555749|gb|OR030801.1| 83797 g80960 i0 89.394 33.3469387755102 132 14 67 0 65 196 24435 24566 Ulva taeniata voucher UC9849 mitochondrion, partial genome blastn 6536 167 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Ulvophyceae Ulvales Ulvaceae Ulva Ulva taeniata
22892231 22892231 PRJNA789095_P_NODE_75038_length_241_cov_4.476190_g73704_i0 PRJNA789095 75038 241 4.47619 10.7876179 root 1 Root_unresolved Root_unresolved 412 8.64e-111   NTclustered gi|2445342045|gb|OP765320.1| 34112 g73704 i0 97.51 110.904564315353 241 6 100 0 1 241 61348 61108 Chlorolobion braunii chloroplast, complete genome blastn 26728 412 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Selenastraceae Chlorolobion Chlorolobion braunii
23723949 23723949 PRJNA789095_P_NODE_57139_length_269_cov_8.270408_g55805_i0 PRJNA789095 57139 269 8.270408 22.24739752 Desmochloris halophila 138176 Plants Plants 364 2.7899999999999998e-96   NTclustered gi|371782123|emb|HE610155.1| 138176 g55805 i0 91.144 69.6059479553903 271 20 100 3 1 269 2911 3179 Desmochloris halophila plastid 16S rRNA gene (partial), 23S rRNA gene (partial) and ITS1, strain UTEX 2073 blastn 18724 364 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Ulvophyceae Chlorocystidales Chlorocystidaceae Desmochloris Desmochloris halophila
23724658 23724658 PRJNA789095_P_NODE_79739_length_225_cov_4.664474_g78405_i0 PRJNA789095 79739 225 4.664474 10.4950665 Lobosphaera incisa 312850 Plants Plants 224 4.01e-54   NTclustered gi|725539263|gb|KM821265.1| 312850 g78405 i0 90.116 57.7822222222222 172 17 76 0 1 172 147227 147056 Lobosphaera incisa chloroplast, complete genome blastn 13001 224 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Lobosphaera Lobosphaera incisa
29990603 29990603 PRJNA789095_P_NODE_28331_length_406_cov_3.231231_g26999_i0 PRJNA789095 28331 406 3.231231 13.11879786 Volvox africanus 51714 Plants Plants 62.8 7.31e-9   NR GIL61322.1 51714 g26999 i0 43.6 1.7512315270936 78 34 57.6 1 171 404 114 181 GIL61322.1 hypothetical protein Vafri_15795 [Volvox africanus] diamond 711 62.8 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Volvocaceae Volvox Volvox africanus
30022296 30022296 PRJNA789095_P_NODE_61551_length_260_cov_1.379679_g60217_i0 PRJNA789095 61551 260 1.379679 3.5871654 Trebouxia sp. A1-2 2608996 Plants Plants 56.2 8.25e-7   NR KAA6428686.1 2608996 g60217 i0 35.6 1.00384615384615 87 54 98.1 1 260 6 64 150 KAA6428686.1 MAG: putative importin-7 protein, partial [Trebouxia sp. A1-2] diamond 261 56.2 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Trebouxia Trebouxia sp. A1-2

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;