RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA789095", tax_clade = "Sar" and tax_phylum = "Apicomplexa"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Apicomplexa · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA789095 · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
9699658 9699658 PRJNA789095_P_NODE_65788_length_251_cov_1.376404_g64454_i0 PRJNA789095 65788 251 1.376404 3.45477404 Toxoplasma gondii 5811 SAR_Eukaryotes SAR_Eukaryotes 56.5 0.002   NTclustered gi|820700576|tpe|LN714500.1| 432359 g64454 i0 100 0.239043824701195 30 0 12 0 123 152 3700816 3700787 TPA_asm: Toxoplasma gondii VEG, chromosome chrX, complete genome blastn 60 56.5 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Toxoplasma Toxoplasma gondii
29115701 29115701 PRJNA789095_P_NODE_54108_length_276_cov_2.807882_g52774_i0 PRJNA789095 54108 276 2.807882 7.74975432 Apicomplexa 5794 SAR_Eukaryotes SAR_Eukaryotes 95.1 3.71e-22   NR XP_013233901.1 5802 g52774 i0 61.4 4.51086956521739 83 32 90.2 0 272 24 93 175 XP_013233901.1 40S ribosomal protein S9, putative [Eimeria tenella] diamond 1245 95.1 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria tenella

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;