RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

10 rows where bioproject = "PRJNA789095", tax_clade = "Opisthokonta" and tax_phylum = "Porifera"

✎ View and edit SQL

This data as json, CSV (advanced)

analysis 2

tax_superkingdom 1

tax_phylum 1

  • Porifera · 10 ✖

tax_kingdom 1

tax_clade 1

  • Opisthokonta · 10 ✖

bioproject 1

  • PRJNA789095 · 10 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
9700043 9700043 PRJNA789095_P_NODE_79248_length_227_cov_5.253247_g77914_i0 PRJNA789095 79248 227 5.253247 11.92487069 Halichondria panicea 6063 Porifera other_Eukaryota 176 1.15e-39   NTclustered gi|2719018713|ref|XM_064543051.1| 6063 g77914 i0 84.358 22.7180616740088 179 28 79 0 2 180 420 598 PREDICTED: Halichondria panicea protein transport protein Sec61 subunit alpha (LOC135345624), mRNA blastn 5157 176 1 Eukaryota Opisthokonta Metazoa Porifera Demospongiae Suberitida Halichondriidae Halichondria Halichondria panicea
24997759 24997759 PRJNA789095_P_NODE_63560_length_255_cov_4.313187_g62226_i0 PRJNA789095 63560 255 4.313187 10.99862685 Oscarella lobularis 121494 Porifera other_Eukaryota 54.7 0.006   NTclustered gi|2746760736|ref|XM_065984368.1| 121494 g62226 i0 100 0.337254901960784 29 0 11 0 45 73 506 478 PREDICTED: Oscarella lobularis spliceosome-associated protein CWC15 homolog (LOC136195096), transcript variant X2, mRNA blastn 86 54.7 1 Eukaryota Opisthokonta Metazoa Porifera Homoscleromorpha Homosclerophorida Oscarellidae Oscarella Oscarella lobularis
26714423 26714423 PRJNA789095_P_NODE_30381_length_385_cov_0.871795_g29048_i0 PRJNA789095 30381 385 0.871795 3.35641075 Metazoa 33208 Porifera other_Eukaryota 121 1.5399999999999998e-30   NR KAI6650136.1 111878 g29048 i0 63.6 4.76883116883117 88 31 67.8 1 385 125 192 279 KAI6650136.1 hypothetical protein LOD99_6053 [Oopsacas minuta] diamond 1836 122 0.991803278688525 Eukaryota Opisthokonta Metazoa Porifera Hexactinellida Lyssacinosida Leucopsacidae Oopsacas Oopsacas minuta
27938233 27938233 PRJNA789095_P_NODE_42345_length_310_cov_2.801688_g41011_i0 PRJNA789095 42345 310 2.801688 8.6852328 Oopsacas minuta 111878 Porifera other_Eukaryota 62 6.83e-9   NR KAI6658352.1 111878 g41011 i0 42.4 2.07096774193548 99 39 78.4 3 15 257 57 155 KAI6658352.1 hypothetical protein LOD99_11075 [Oopsacas minuta] diamond 642 62 1 Eukaryota Opisthokonta Metazoa Porifera Hexactinellida Lyssacinosida Leucopsacidae Oopsacas Oopsacas minuta
28506501 28506501 PRJNA789095_P_NODE_70227_length_246_cov_4.161850_g68893_i0 PRJNA789095 70227 246 4.16185 10.238151 Oopsacas minuta 111878 Porifera other_Eukaryota 49.3 9.92e-5   NR KAI6656099.1 111878 g68893 i0 69.7 0.402439024390244 33 10 40.2 0 13 111 94 126 KAI6656099.1 hypothetical protein LOD99_1432 [Oopsacas minuta] diamond 99 49.3 1 Eukaryota Opisthokonta Metazoa Porifera Hexactinellida Lyssacinosida Leucopsacidae Oopsacas Oopsacas minuta
28831340 28831340 PRJNA789095_P_NODE_63728_length_255_cov_2.120879_g62394_i0 PRJNA789095 63728 255 2.120879 5.40824145 Opisthokonta 33154 Porifera other_Eukaryota 98.2 9.06e-25   NR XP_064407423.1 6063 g62394 i0 62.2 16.4941176470588 74 28 87.1 0 250 29 4 77 XP_064407423.1 probable small nuclear ribonucleoprotein G [Halichondria panicea] diamond 4206 99 0.991919191919192 Eukaryota Opisthokonta Metazoa Porifera Demospongiae Suberitida Halichondriidae Halichondria Halichondria panicea
28957930 28957930 PRJNA789095_P_NODE_74288_length_242_cov_2.071006_g72954_i0 PRJNA789095 74288 242 2.071006 5.01183452 Metazoa 33208 Porifera other_Eukaryota 71.2 1.99e-12   NR XP_065904205.1 196820 g72954 i0 86.1 1.82231404958678 36 5 44.6 0 5 112 271 306 XP_065904205.1 very-long-chain enoyl-CoA reductase-like [Dysidea avara] diamond 441 71.2 1 Eukaryota Opisthokonta Metazoa Porifera Demospongiae Dictyoceratida Dysideidae Dysidea Dysidea avara
30284542 30284542 PRJNA789095_P_NODE_51932_length_281_cov_2.105769_g50598_i0 PRJNA789095 51932 281 2.105769 5.91721089 Metazoa 33208 Porifera other_Eukaryota 44.3 0.0137   NR XP_062519445.1 121492 g50598 i0 70.4 2.26334519572954 27 8 28.8 0 240 160 204 230 XP_062519445.1 protein lifeguard 1-like [Corticium candelabrum] diamond 636 44.3 1 Eukaryota Opisthokonta Metazoa Porifera Homoscleromorpha Homosclerophorida Plakinidae Corticium Corticium candelabrum
30496195 30496195 PRJNA789095_P_NODE_50853_length_283_cov_8.619048_g49519_i0 PRJNA789095 50853 283 8.619048 24.39190584 Sycon ciliatum 27933 Porifera other_Eukaryota 104 1.0099999999999999e-23   NR XP_065197555.1 27933 g49519 i0 52.1 1.99293286219081 94 45 99.6 0 282 1 448 541 XP_065197555.1 uncharacterized protein K02A2.6-like [Sycon ciliatum] diamond 564 104 1 Eukaryota Opisthokonta Metazoa Porifera Calcarea Leucosolenida Sycettidae Sycon Sycon ciliatum
31918662 31918662 PRJNA789095_P_NODE_69737_length_247_cov_0.885057_g68403_i0 PRJNA789095 69737 247 0.885057 2.18609079 Dysidea avara 196820 Porifera other_Eukaryota 109 1.42e-26   NR XP_065900210.1 196820 g68403 i0 61.7 3.93522267206478 81 31 98.4 0 245 3 85 165 XP_065900210.1 uncharacterized protein [Dysidea avara] diamond 972 110 0.990909090909091 Eukaryota Opisthokonta Metazoa Porifera Demospongiae Dictyoceratida Dysideidae Dysidea Dysidea avara

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;