RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

13 rows where bioproject = "PRJNA789095" and tax_clade = "Discoba"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_phylum 2

analysis 2

tax_superkingdom 1

tax_clade 1

  • Discoba · 13 ✖

bioproject 1

  • PRJNA789095 · 13 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2046468 2046468 PRJNA789095_P_NODE_38222_length_326_cov_1.217391_g36888_i0 PRJNA789095 38222 326 1.217391 3.96869466 Leptomonas pyrrhocoris 157538 Euglenozoa other_Eukaryota 392 1.5899999999999994e-104   NTclustered gi|1002452927|ref|XM_015800798.1| 157538 g36888 i0 88.379 14.2883435582822 327 36 100 2 1 326 351 26 Leptomonas pyrrhocoris putative Ribosomal protein l3 mRNA blastn 4658 392 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Leptomonas Leptomonas pyrrhocoris
5874788 5874788 PRJNA789095_P_NODE_62865_length_257_cov_1.646739_g61531_i0 PRJNA789095 62865 257 1.646739 4.23211923 Bodo saltans 75058 Euglenozoa other_Eukaryota 95.9 3.58e-21   NR CUI14905.1 75058 g61531 i0 81.8 0.642023346303502 55 10 64.2 0 41 205 299 353 CUI14905.1 calreticulin, putative [Bodo saltans] diamond 165 95.9 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Eubodonida Bodonidae Bodo Bodo saltans
5875138 5875138 PRJNA789095_P_NODE_74665_length_242_cov_0.911243_g73331_i0 PRJNA789095 74665 242 0.911243 2.20520806 Rhynchobodo ATCC5 51334 Euglenozoa other_Eukaryota 135 3.4200000000000003e-36   NR ACO50135.1 51334 g73331 i0 77.5 0.991735537190083 80 18 99.2 0 241 2 131 210 ACO50135.1 elongation factor 1 alpha, partial [Rhynchobodo ATCC50359] diamond 240 135 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Neobodonida   Rhynchobodo Rhynchobodo ATCC50359
17349497 17349497 PRJNA789095_P_NODE_60594_length_262_cov_1.624339_g59260_i0 PRJNA789095 60594 262 1.624339 4.25576818 Bodo saltans 75058 Euglenozoa other_Eukaryota 134 1.52e-35   NR CUG88850.1 75058 g59260 i0 78 0.938931297709924 82 18 93.9 0 258 13 161 242 CUG88850.1 mannose-1-phosphate guanyltransferase, putative [Bodo saltans] diamond 246 134 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Eubodonida Bodonidae Bodo Bodo saltans
20340893 20340893 PRJNA789095_P_NODE_61516_length_260_cov_1.508021_g60182_i0 PRJNA789095 61516 260 1.508021 3.9208546 Bodo saltans 75058 Euglenozoa other_Eukaryota 142 1.37e-38   NR CUG61884.1 75058 g60182 i0 79.1 0.992307692307692 86 18 99.2 0 2 259 179 264 CUG61884.1 acyl dehydrogenase-like protein, putative [Bodo saltans] diamond 258 142 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Eubodonida Bodonidae Bodo Bodo saltans
23724421 23724421 PRJNA789095_P_NODE_71679_length_245_cov_0.895349_g70345_i0 PRJNA789095 71679 245 0.895349 2.19360505 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 278 3.35e-70   NTclustered gi|290975420|ref|XM_002670395.1| 5762 g70345 i0 86.716 2.21224489795918 271 10 100 13 1 245 347 77 Naegleria gruberi VWFA domain-containing protein (NAEGRDRAFT_59701), mRNA blastn 542 278 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
26832265 26832265 PRJNA789095_P_NODE_68561_length_248_cov_1.708571_g67227_i0 PRJNA789095 68561 248 1.708571 4.23725608 Diplonema papillatum 91374 Euglenozoa other_Eukaryota 90.5 6.19e-19   NR KAJ9441406.1 91374 g67227 i0 71.7 0.641129032258065 53 15 64.1 0 1 159 599 651 KAJ9441406.1 Receptor-type adenylate cyclase, partial [Diplonema papillatum] diamond 159 90.5 1 Eukaryota Discoba   Euglenozoa Diplonemea   Diplonemidae Diplonema Diplonema papillatum
26999494 26999494 PRJNA789095_P_NODE_52962_length_279_cov_1.383495_g51628_i0 PRJNA789095 52962 279 1.383495 3.85995105 Naegleria 5761 Heterolobosea other_Eukaryota 65.9 4.26e-10   NR XP_044561873.1 5763 g51628 i0 50.8 1.95698924731183 61 30 65.6 0 1 183 94 154 XP_044561873.1 uncharacterized protein FDP41_003813 [Naegleria fowleri] diamond 546 65.9 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria fowleri
29873435 29873435 PRJNA789095_P_NODE_51151_length_283_cov_1.461905_g49817_i0 PRJNA789095 51151 283 1.461905 4.13719115 Trypanosoma 5690 Euglenozoa other_Eukaryota 135 6.55e-35   NR XP_009306152.1 71804 g49817 i0 68.5 7.77031802120141 92 29 97.5 0 3 278 114 205 XP_009306152.1 putative sphingosine 1-phosphate lyase [Trypanosoma grayi] diamond 2199 135 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma grayi
30970137 30970137 PRJNA789095_P_NODE_61554_length_260_cov_1.374332_g60220_i0 PRJNA789095 61554 260 1.374332 3.5732632 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 43.5 0.025   NR XP_002675919.1 5762 g60220 i0 40.6 0.738461538461539 64 35 70.4 1 28 210 430 493 XP_002675919.1 uncharacterized protein NAEGRDRAFT_80122 [Naegleria gruberi] diamond 192 43.5 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
31074077 31074077 PRJNA789095_P_NODE_54675_length_275_cov_1.712871_g53341_i0 PRJNA789095 54675 275 1.712871 4.71039525 Euglenozoa 33682 Euglenozoa other_Eukaryota 83.6 2.1e-17   NR EPY30488.1 28005 g53341 i0 60.9 2.91272727272727 69 27 75.3 0 1 207 149 217 EPY30488.1 small subunit ribosomal protein S3e [Strigomonas culicis] diamond 801 84 0.995238095238095 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Strigomonas Strigomonas culicis
31127600 31127600 PRJNA789095_P_NODE_72875_length_244_cov_0.900585_g71541_i0 PRJNA789095 72875 244 0.900585 2.1974274 Trypanosoma conorhini 83891 Euglenozoa other_Eukaryota 117 1.16e-30   NR XP_029229126.1 83891 g71541 i0 68.9 1.10655737704918 90 19 99.6 1 243 1 60 149 XP_029229126.1 RNA-binding protein PNO1 [Trypanosoma conorhini] diamond 270 117 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma conorhini
31918664 31918664 PRJNA789095_P_NODE_73877_length_243_cov_0.905882_g72543_i0 PRJNA789095 73877 243 0.905882 2.20129326 Bodo saltans 75058 Euglenozoa other_Eukaryota 104 4.89e-24   NR CUG91459.1 75058 g72543 i0 60 0.987654320987654 80 32 98.8 0 2 241 304 383 CUG91459.1 aldehyde dehydrogenase, putative [Bodo saltans] diamond 240 104 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Eubodonida Bodonidae Bodo Bodo saltans

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;