RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA788929" and tax_phylum = "Peploviricota"

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tax_superkingdom 1

tax_phylum 1

  • Peploviricota · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJNA788929 · 3 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7592521 7592521 PRJNA788929_P_NODE_8986_length_608_cov_16.910280_g8336_i0 PRJNA788929 8986 608 16.91028 102.8145024 root 1 Root_unresolved Root_unresolved 56.5 0.005   NTclustered gi|671698184|gb|KM192300.1| 10359 g8336 i0 100 5.08223684210526 30 0 5 0 579 608 39227 39256 Human herpesvirus 5 strain Merlin isolate RCMV1528, complete genome blastn 3090 56.5 1 Viruses   Heunggongvirae Peploviricota Herviviricetes Herpesvirales Orthoherpesviridae Cytomegalovirus Cytomegalovirus humanbeta5
11418262 11418262 PRJNA788929_P_NODE_35849_length_259_cov_3.844086_g35188_i0 PRJNA788929 35849 259 3.844086 9.95618274 root 1 Root_unresolved Root_unresolved 56.5 0.002   NTclustered gi|671698184|gb|KM192300.1| 10359 g35188 i0 100 11.930501930501901 30 0 12 0 230 259 39435 39464 Human herpesvirus 5 strain Merlin isolate RCMV1528, complete genome blastn 3090 56.5 1 Viruses   Heunggongvirae Peploviricota Herviviricetes Herpesvirales Orthoherpesviridae Cytomegalovirus Cytomegalovirus humanbeta5
13968344 13968344 PRJNA788929_P_NODE_6691_length_735_cov_7.845921_g6069_i0 PRJNA788929 6691 735 7.845921 57.66751935 root 1 Root_unresolved Root_unresolved 71.3 2.03e-7   NTclustered gi|2681927455|gb|PP378489.1| 10335 g6069 i0 100 5.2734693877551 38 0 5 0 698 735 19472 19509 Mutant Human alphaherpesvirus 3 isolate pOka_gC_GFP, complete sequence blastn 3876 71.3 1 Viruses   Heunggongvirae Peploviricota Herviviricetes Herpesvirales Orthoherpesviridae Varicellovirus Varicellovirus humanalpha3

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;