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contig_metadata

32 rows where bioproject = "PRJNA788929", tax_phylum = "Kitrinoviricota" and tax_superkingdom = "Viruses"

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tax_superkingdom 1

  • Viruses · 32 ✖

tax_phylum 1

  • Kitrinoviricota · 32 ✖

tax_kingdom 1

bioproject 1

  • PRJNA788929 · 32 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
769331 769331 PRJNA788929_P_NODE_29381_length_291_cov_21.371560_g28720_i0 PRJNA788929 29381 291 21.37156 62.1912396 Carlavirus latensdianthi 3427766 Viruses Viruses 52.8 0.027   NTclustered gi|1995060321|gb|MN450069.1| 12164 g28720 i0 100 0.0962199312714777 28 0 10 0 264 291 42 15 Carnation latent virus isolate KL, complete genome blastn 28 52.8 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Carlavirus Carlavirus latensdianthi
2045204 2045204 PRJNA788929_P_NODE_25102_length_319_cov_46.378049_g24441_i0 PRJNA788929 25102 319 46.378049 147.94597631 Carlavirus latensdianthi 3427766 Viruses Viruses 52.8 0.03   NTclustered gi|1995060321|gb|MN450069.1| 12164 g24441 i0 100 0.0877742946708464 28 0 9 0 1 28 15 42 Carnation latent virus isolate KL, complete genome blastn 28 52.8 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Carlavirus Carlavirus latensdianthi
2045303 2045303 PRJNA788929_P_NODE_30482_length_285_cov_23.849057_g29821_i0 PRJNA788929 30482 285 23.849057 67.96981245 Carlavirus latensdianthi 3427766 Viruses Viruses 52.8 0.026   NTclustered gi|1995060321|gb|MN450069.1| 12164 g29821 i0 100 0.0982456140350877 28 0 10 0 258 285 42 15 Carnation latent virus isolate KL, complete genome blastn 28 52.8 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Carlavirus Carlavirus latensdianthi
3320326 3320326 PRJNA788929_P_NODE_11983_length_503_cov_26.195349_g11327_i0 PRJNA788929 11983 503 26.195349 131.76260547 Jujube closterovirus 1 3043313 Viruses Viruses 52.8 0.049   NTclustered gi|2496749738|gb|OP673405.1| 3043313 g11327 i0 100 0.0556660039761431 28 0 6 0 1 28 8 35 Jujube closterovirus 1 isolate AKS15-20, complete genome blastn 28 52.8 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Closteroviridae   Jujube closterovirus 1
3320445 3320445 PRJNA788929_P_NODE_18583_length_382_cov_24.168285_g17923_i0 PRJNA788929 18583 382 24.168285 92.3228487 Carlavirus latensdianthi 3427766 Viruses Viruses 52.8 0.036   NTclustered gi|1995060321|gb|MN450069.1| 12164 g17923 i0 100 0.0732984293193717 28 0 7 0 355 382 42 15 Carnation latent virus isolate KL, complete genome blastn 28 52.8 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Carlavirus Carlavirus latensdianthi
3320471 3320471 PRJNA788929_P_NODE_20463_length_361_cov_5.090278_g19803_i0 PRJNA788929 20463 361 5.090278 18.37590358 Carlavirus latensdianthi 3427766 Viruses Viruses 54.7 0.01   NTclustered gi|1995060321|gb|MN450069.1| 12164 g19803 i0 100 0.46814404432133 29 0 8 0 18 46 13 41 Carnation latent virus isolate KL, complete genome blastn 169 54.7 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Carlavirus Carlavirus latensdianthi
3320897 3320897 PRJNA788929_P_NODE_49923_length_199_cov_4.619048_g49262_i0 PRJNA788929 49923 199 4.619048 9.19190552 Carlavirus latensdianthi 3427766 Viruses Viruses 52.8 0.017   NTclustered gi|1995060321|gb|MN450069.1| 12164 g49262 i0 100 0.14070351758794 28 0 14 0 172 199 42 15 Carnation latent virus isolate KL, complete genome blastn 28 52.8 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Carlavirus Carlavirus latensdianthi
5872791 5872791 PRJNA788929_P_NODE_22985_length_337_cov_11.496212_g22324_i0 PRJNA788929 22985 337 11.496212 38.74223444 Carlavirus latensdianthi 3427766 Viruses Viruses 54.7 0.009   NTclustered gi|1995060321|gb|MN450069.1| 12164 g22324 i0 94.444 0.439169139465875 36 1 11 1 302 337 47 13 Carnation latent virus isolate KL, complete genome blastn 148 54.7 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Carlavirus Carlavirus latensdianthi
5872964 5872964 PRJNA788929_P_NODE_34665_length_264_cov_10.141361_g34004_i0 PRJNA788929 34665 264 10.141361 26.77319304 Carlavirus latensdianthi 3427766 Viruses Viruses 52.8 0.024   NTclustered gi|1995060321|gb|MN450069.1| 12164 g34004 i0 100 0.106060606060606 28 0 11 0 237 264 42 15 Carnation latent virus isolate KL, complete genome blastn 28 52.8 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Carlavirus Carlavirus latensdianthi
7147962 7147962 PRJNA788929_P_NODE_38106_length_250_cov_10.361582_g37445_i0 PRJNA788929 38106 250 10.361582 25.903955 Carlavirus latensdianthi 3427766 Viruses Viruses 56.5 0.002   NTclustered gi|1995060321|gb|MN450069.1| 12164 g37445 i0 100 0.12 30 0 12 0 221 250 44 15 Carnation latent virus isolate KL, complete genome blastn 30 56.5 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Carlavirus Carlavirus latensdianthi
7148105 7148105 PRJNA788929_P_NODE_47686_length_213_cov_4.664286_g47025_i0 PRJNA788929 47686 213 4.664286 9.93492918 Jujube closterovirus 1 3043313 Viruses Viruses 52.8 0.019   NTclustered gi|2496749738|gb|OP673405.1| 3043313 g47025 i0 100 0.131455399061033 28 0 13 0 186 213 35 8 Jujube closterovirus 1 isolate AKS15-20, complete genome blastn 28 52.8 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Closteroviridae   Jujube closterovirus 1
7148268 7148268 PRJNA788929_P_NODE_9806_length_574_cov_6.367265_g9153_i0 PRJNA788929 9806 574 6.367265 36.5481011 Carlavirus latensdianthi 3427766 Viruses Viruses 54.7 0.016   NTclustered gi|1995060321|gb|MN450069.1| 12164 g9153 i0 100 0.0505226480836237 29 0 5 0 546 574 43 15 Carnation latent virus isolate KL, complete genome blastn 29 54.7 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Carlavirus Carlavirus latensdianthi
8422227 8422227 PRJNA788929_P_NODE_13007_length_477_cov_12.267327_g12350_i0 PRJNA788929 13007 477 12.267327 58.51514979 Carlavirus latensdianthi 3427766 Viruses Viruses 54.7 0.013   NTclustered gi|1995060321|gb|MN450069.1| 12164 g12350 i0 100 0.0607966457023061 29 0 6 0 449 477 43 15 Carnation latent virus isolate KL, complete genome blastn 29 54.7 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Carlavirus Carlavirus latensdianthi
8422243 8422243 PRJNA788929_P_NODE_13707_length_461_cov_31.902062_g13049_i0 PRJNA788929 13707 461 31.902062 147.06850582 Carlavirus latensdianthi 3427766 Viruses Viruses 56.5 0.003   NTclustered gi|1995060321|gb|MN450069.1| 12164 g13049 i0 100 0.0650759219088937 30 0 7 0 432 461 44 15 Carnation latent virus isolate KL, complete genome blastn 30 56.5 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Carlavirus Carlavirus latensdianthi
8422353 8422353 PRJNA788929_P_NODE_20107_length_364_cov_46.601375_g19447_i0 PRJNA788929 20107 364 46.601375 169.629005 Carlavirus latensdianthi 3427766 Viruses Viruses 54.7 0.01   NTclustered gi|1995060321|gb|MN450069.1| 12164 g19447 i0 100 0.387362637362637 29 0 8 0 336 364 41 13 Carnation latent virus isolate KL, complete genome blastn 141 54.7 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Carlavirus Carlavirus latensdianthi
8422413 8422413 PRJNA788929_P_NODE_23587_length_332_cov_1.444015_g22926_i0 PRJNA788929 23587 332 1.444015 4.7941298 Carlavirus latensdianthi 3427766 Viruses Viruses 56.5 0.002   NTclustered gi|1995060321|gb|MN450069.1| 12164 g22926 i0 92.5 0.120481927710843 40 1 11 2 1 38 15 54 Carnation latent virus isolate KL, complete genome blastn 40 56.5 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Carlavirus Carlavirus latensdianthi
8422797 8422797 PRJNA788929_P_NODE_49287_length_203_cov_5.076923_g48626_i0 PRJNA788929 49287 203 5.076923 10.30615369 Carlavirus latensdianthi 3427766 Viruses Viruses 56.5 0.001   NTclustered gi|1995060321|gb|MN450069.1| 12164 g48626 i0 97.059 0.167487684729064 34 0 16 1 1 33 15 48 Carnation latent virus isolate KL, complete genome blastn 34 56.5 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Carlavirus Carlavirus latensdianthi
9697540 9697540 PRJNA788929_P_NODE_21988_length_346_cov_29.098901_g21327_i0 PRJNA788929 21988 346 29.098901 100.68219746 Carlavirus latensdianthi 3427766 Viruses Viruses 58.4 7.04e-4   NTclustered gi|1995060321|gb|MN450069.1| 12164 g21327 i0 86.792 0.569364161849711 53 6 15 1 294 346 64 13 Carnation latent virus isolate KL, complete genome blastn 197 58.4 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Carlavirus Carlavirus latensdianthi
9697925 9697925 PRJNA788929_P_NODE_47248_length_216_cov_4.426573_g46587_i0 PRJNA788929 47248 216 4.426573 9.56139768 Carlavirus latensdianthi 3427766 Viruses Viruses 58.4 4.1e-4   NTclustered gi|1995060321|gb|MN450069.1| 12164 g46587 i0 92.683 0.189814814814815 41 1 19 2 176 216 54 16 Carnation latent virus isolate KL, complete genome blastn 41 58.4 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Carlavirus Carlavirus latensdianthi
12249035 12249035 PRJNA788929_P_NODE_38190_length_250_cov_4.169492_g37529_i0 PRJNA788929 38190 250 4.169492 10.42373 Carlavirus latensdianthi 3427766 Viruses Viruses 52.8 0.023   NTclustered gi|1995060321|gb|MN450069.1| 12164 g37529 i0 100 0.112 28 0 11 0 223 250 43 16 Carnation latent virus isolate KL, complete genome blastn 28 52.8 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Carlavirus Carlavirus latensdianthi
13523019 13523019 PRJNA788929_P_NODE_24111_length_327_cov_13.590551_g23450_i0 PRJNA788929 24111 327 13.590551 44.44110177 Carlavirus latensdianthi 3427766 Viruses Viruses 54.7 0.009   NTclustered gi|1995060321|gb|MN450069.1| 12164 g23450 i0 100 0.0886850152905199 29 0 9 0 299 327 43 15 Carnation latent virus isolate KL, complete genome blastn 29 54.7 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Carlavirus Carlavirus latensdianthi
13523519 13523519 PRJNA788929_P_NODE_9771_length_575_cov_32.109562_g9118_i0 PRJNA788929 9771 575 32.109562 184.6299815 Carlavirus latensdianthi 3427766 Viruses Viruses 54.7 0.016   NTclustered gi|1995060321|gb|MN450069.1| 12164 g9118 i0 100 0.0504347826086957 29 0 5 0 1 29 15 43 Carnation latent virus isolate KL, complete genome blastn 29 54.7 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Carlavirus Carlavirus latensdianthi
14798193 14798193 PRJNA788929_P_NODE_43392_length_237_cov_10.213415_g42731_i0 PRJNA788929 43392 237 10.213415 24.20579355 Carlavirus latensdianthi 3427766 Viruses Viruses 54.7 0.006   NTclustered gi|1995060321|gb|MN450069.1| 12164 g42731 i0 87.5 0.793248945147679 48 5 20 1 1 48 13 59 Carnation latent virus isolate KL, complete genome blastn 188 54.7 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Carlavirus Carlavirus latensdianthi
16072093 16072093 PRJNA788929_P_NODE_45713_length_225_cov_39.368421_g45052_i0 PRJNA788929 45713 225 39.368421 88.57894725 Carlavirus latensdianthi 3427766 Viruses Viruses 52.8 0.02   NTclustered gi|1995060321|gb|MN450069.1| 12164 g45052 i0 100 0.124444444444444 28 0 12 0 1 28 15 42 Carnation latent virus isolate KL, complete genome blastn 28 52.8 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Carlavirus Carlavirus latensdianthi
16072124 16072124 PRJNA788929_P_NODE_48053_length_210_cov_10.291971_g47392_i0 PRJNA788929 48053 210 10.291971 21.6131391 Carlavirus latensdianthi 3427766 Viruses Viruses 52.8 0.018   NTclustered gi|1995060321|gb|MN450069.1| 12164 g47392 i0 100 0.133333333333333 28 0 13 0 1 28 15 42 Carnation latent virus isolate KL, complete genome blastn 28 52.8 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Carlavirus Carlavirus latensdianthi
18621087 18621087 PRJNA788929_P_NODE_44995_length_229_cov_5.916667_g44334_i0 PRJNA788929 44995 229 5.916667 13.54916743 Carlavirus latensdianthi 3427766 Viruses Viruses 52.8 0.02   NTclustered gi|1995060321|gb|MN450069.1| 12164 g44334 i0 100 0.122270742358079 28 0 12 0 1 28 15 42 Carnation latent virus isolate KL, complete genome blastn 28 52.8 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Carlavirus Carlavirus latensdianthi
19896074 19896074 PRJNA788929_P_NODE_22596_length_341_cov_6.511194_g21935_i0 PRJNA788929 22596 341 6.511194 22.20317154 Carlavirus latensdianthi 3427766 Viruses Viruses 52.8 0.032   NTclustered gi|1995060321|gb|MN450069.1| 12164 g21935 i0 100 0.0821114369501466 28 0 8 0 314 341 42 15 Carnation latent virus isolate KL, complete genome blastn 28 52.8 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Carlavirus Carlavirus latensdianthi
19896228 19896228 PRJNA788929_P_NODE_33016_length_272_cov_12.829146_g32355_i0 PRJNA788929 33016 272 12.829146 34.89527712 Jujube closterovirus 1 3043313 Viruses Viruses 54.7 0.007   NTclustered gi|2496749738|gb|OP673405.1| 3043313 g32355 i0 100 0.106617647058824 29 0 11 0 1 29 8 36 Jujube closterovirus 1 isolate AKS15-20, complete genome blastn 29 54.7 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Closteroviridae   Jujube closterovirus 1
19896469 19896469 PRJNA788929_P_NODE_49016_length_204_cov_26.045802_g48355_i0 PRJNA788929 49016 204 26.045802 53.13343608 Jujube closterovirus 1 3043313 Viruses Viruses 52.8 0.018   NTclustered gi|2496749738|gb|OP673405.1| 3043313 g48355 i0 100 0.137254901960784 28 0 14 0 177 204 35 8 Jujube closterovirus 1 isolate AKS15-20, complete genome blastn 28 52.8 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Closteroviridae   Jujube closterovirus 1
22446686 22446686 PRJNA788929_P_NODE_31558_length_279_cov_16.703883_g30897_i0 PRJNA788929 31558 279 16.703883 46.60383357 Carlavirus latensdianthi 3427766 Viruses Viruses 56.5 0.002   NTclustered gi|1995060321|gb|MN450069.1| 12164 g30897 i0 100 0.10752688172043 30 0 11 0 250 279 44 15 Carnation latent virus isolate KL, complete genome blastn 30 56.5 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Carlavirus Carlavirus latensdianthi
23722315 23722315 PRJNA788929_P_NODE_38519_length_249_cov_17.500000_g37858_i0 PRJNA788929 38519 249 17.5 43.575 Carlavirus latensdianthi 3427766 Viruses Viruses 52.8 0.023   NTclustered gi|1995060321|gb|MN450069.1| 12164 g37858 i0 100 0.112449799196787 28 0 11 0 222 249 42 15 Carnation latent virus isolate KL, complete genome blastn 28 52.8 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Carlavirus Carlavirus latensdianthi
23722434 23722434 PRJNA788929_P_NODE_47159_length_216_cov_8.223776_g46498_i0 PRJNA788929 47159 216 8.223776 17.76335616 Carlavirus latensdianthi 3427766 Viruses Viruses 54.7 0.005   NTclustered gi|1995060321|gb|MN450069.1| 12164 g46498 i0 100 0.134259259259259 29 0 13 0 1 29 15 43 Carnation latent virus isolate KL, complete genome blastn 29 54.7 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Carlavirus Carlavirus latensdianthi

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;