RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA788929" and tax_kingdom = "Pararnavirae"

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analysis 2

tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Pararnavirae · 2 ✖

bioproject 1

  • PRJNA788929 · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
20340787 20340787 PRJNA788929_P_NODE_49836_length_199_cov_7.714286_g49175_i0 PRJNA788929 49836 199 7.714286 15.35142914 Viruses 10239 Viruses Viruses 298 2.01e-76   NTclustered gi|331934|gb|J02255.1|MLMCG 11786 g49175 i0 98.246 85.8844221105528 171 2 86 1 6 176 3740 3909 Moloney murine leukemia virus, complete genome blastn 17091 298 1 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales Retroviridae Gammaretrovirus Gammaretrovirus murleu
31190797 31190797 PRJNA788929_P_NODE_15695_length_423_cov_18.551429_g15036_i0 PRJNA788929 15695 423 18.551429 78.47254467 Hepatitis B virus 10407 Viruses Viruses 45.1 0.0298   NR ACC77436.1 10407 g15036 i0 30.8 0.645390070921986 91 51 59.6 3 145 396 176 261 ACC77436.1 middle S protein [Hepatitis B virus] diamond 273 45.1 1 Viruses   Pararnavirae Artverviricota Revtraviricetes Blubervirales Hepadnaviridae Orthohepadnavirus Orthohepadnavirus hominoidei

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;