RNAquarium Metadata Server
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contig_metadata

8 rows where bioproject = "PRJNA788929", tax_kingdom = "Metazoa" and tax_phylum = "Porifera"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Porifera · 8 ✖

tax_kingdom 1

  • Metazoa · 8 ✖

tax_clade 1

bioproject 1

  • PRJNA788929 · 8 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4597760 4597760 PRJNA788929_P_NODE_40404_length_245_cov_10.441860_g39743_i0 PRJNA788929 40404 245 10.44186 25.582557 Hyrtios reticulatus 1162751 Porifera other_Eukaryota 139 1.6499999999999999e-28   NTclustered gi|512765404|gb|KC869642.1| 1162751 g39743 i0 91.429 38.6571428571429 105 4 42 5 140 242 2047 2148 Hyrtios reticulatus voucher NCI426 28S ribosomal RNA gene, partial sequence blastn 9471 139 1 Eukaryota Opisthokonta Metazoa Porifera Demospongiae Dictyoceratida Thorectidae Hyrtios Hyrtios reticulatus
10143029 10143029 PRJNA788929_P_NODE_8648_length_622_cov_25.655738_g7999_i0 PRJNA788929 8648 622 25.655738 159.57869036 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 213 2.67e-50   NTclustered gi|2719038895|ref|XR_010393624.1| 6063 g7999 i0 90.798 32.8938906752412 163 9 32 6 192 352 2167 2009 PREDICTED: Halichondria panicea large subunit ribosomal RNA (LOC135332780), rRNA blastn 20460 215 0.990697674418605 Eukaryota Opisthokonta Metazoa Porifera Demospongiae Suberitida Halichondriidae Halichondria Halichondria panicea
17792066 17792066 PRJNA788929_P_NODE_43134_length_238_cov_18.557576_g42473_i0 PRJNA788929 43134 238 18.557576 44.16703088 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 115 2.69e-21   NTclustered gi|512765374|gb|KC869612.1| 1183873 g42473 i0 85.217 47.3655462184874 115 13 48 4 34 147 2031 2142 Stelletta fibrosa voucher P24 28S ribosomal RNA gene, partial sequence blastn 11273 115 1 Eukaryota Opisthokonta Metazoa Porifera Demospongiae Tetractinellida Geodiidae Geodia Geodia fibrosa
26936306 26936306 PRJNA788929_P_NODE_20922_length_356_cov_82.265018_g20262_i0 PRJNA788929 20922 356 82.265018 292.86346408000003 Metazoa 33208 Porifera other_Eukaryota 47.4 0.00276   NR XP_003382489.1 400682 g20262 i0 63.3 1.44101123595506 30 11 25.3 0 322 233 281 310 XP_003382489.1 PREDICTED: receptor of activated protein C kinase 1-like [Amphimedon queenslandica] diamond 513 47.4 1 Eukaryota Opisthokonta Metazoa Porifera Demospongiae Haplosclerida Niphatidae Amphimedon Amphimedon queenslandica
28317092 28317092 PRJNA788929_P_NODE_4846_length_910_cov_60.862605_g4290_i0 PRJNA788929 4846 910 60.862605 553.8497055 Halichondria panicea 6063 Porifera other_Eukaryota 169 3.959999999999999e-48   NR XP_064394753.1 6063 g4290 i0 59.5 1.32197802197802 131 53 43.2 0 818 426 4 134 XP_064394753.1 nuclear cap-binding protein subunit 2-like [Halichondria panicea] diamond 1203 169 1 Eukaryota Opisthokonta Metazoa Porifera Demospongiae Suberitida Halichondriidae Halichondria Halichondria panicea
28980253 28980253 PRJNA788929_P_NODE_2948_length_1218_cov_48.311790_g2571_i0 PRJNA788929 2948 1218 48.31179 588.4376022 Sycon ciliatum 27933 Porifera other_Eukaryota 189 1.6199999999999998e-48   NR XP_065192888.1 27933 g2571 i0 32.5 0.933497536945813 379 228 88.4 8 1123 47 3029 3399 XP_065192888.1 spectrin alpha chain, non-erythrocytic 1-like [Sycon ciliatum] diamond 1137 189 1 Eukaryota Opisthokonta Metazoa Porifera Calcarea Leucosolenida Sycettidae Sycon Sycon ciliatum
32013559 32013559 PRJNA788929_P_NODE_24458_length_324_cov_51.047809_g23797_i0 PRJNA788929 24458 324 51.047809 165.39490116 Corticium candelabrum 121492 Porifera other_Eukaryota 73.2 2.11e-12   NR XP_062501809.1 121492 g23797 i0 38.7 1.4537037037037 75 46 69.4 0 25 249 1127 1201 XP_062501809.1 uncharacterized protein LOC134178910 [Corticium candelabrum] diamond 471 73.2 1 Eukaryota Opisthokonta Metazoa Porifera Homoscleromorpha Homosclerophorida Plakinidae Corticium Corticium candelabrum
32583189 32583189 PRJNA788929_P_NODE_13519_length_465_cov_43.747449_g12862_i0 PRJNA788929 13519 465 43.747449 203.42563785 Dysidea avara 196820 Porifera other_Eukaryota 69.7 1.5e-10   NR XP_065917509.1 196820 g12862 i0 32.9 0.941935483870968 146 79 84.5 6 8 400 462 603 XP_065917509.1 syntaxin-binding protein 1-like isoform X2 [Dysidea avara] diamond 438 69.7 1 Eukaryota Opisthokonta Metazoa Porifera Demospongiae Dictyoceratida Dysideidae Dysidea Dysidea avara

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;