RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA788929", tax_kingdom = "Bacillati" and tax_phylum = "Vulcanimicrobiota"

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tax_superkingdom 1

tax_phylum 1

  • Vulcanimicrobiota · 2 ✖

tax_kingdom 1

  • Bacillati · 2 ✖

bioproject 1

  • PRJNA788929 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
9697895 9697895 PRJNA788929_P_NODE_44168_length_233_cov_8.168750_g43507_i0 PRJNA788929 44168 233 8.16875 19.0331875 Vulcanimicrobiota bacterium 3107663 Bacteria Bacteria 294 3.14e-75   NTclustered gi|2202949261|emb|OV972893.1| 3107663 g43507 i0 92.381 526.605150214592 210 11 89 5 4 210 5032014 5031807 MAG: Candidatus Eremiobacteraeota bacterium isolate E.malaspinii_MAG_MP1648_PBLIHF genome assembly, chromosome: 1 blastn 122699 294 1 Bacteria   Bacillati Vulcanimicrobiota         Vulcanimicrobiota bacterium
14797742 14797742 PRJNA788929_P_NODE_15872_length_420_cov_67.850144_g15213_i0 PRJNA788929 15872 420 67.850144 284.9706048 Vulcanimicrobiota bacterium 3107663 Bacteria Bacteria 612 1.4799999999999999e-170   NTclustered gi|2202949261|emb|OV972893.1| 3107663 g15213 i0 95.801 88.6119047619048 381 12 90 4 10 388 5031779 5031401 MAG: Candidatus Eremiobacteraeota bacterium isolate E.malaspinii_MAG_MP1648_PBLIHF genome assembly, chromosome: 1 blastn 37217 612 1 Bacteria   Bacillati Vulcanimicrobiota         Vulcanimicrobiota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;