RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA788929", tax_clade = "Sar" and tax_phylum = "Perkinsozoa"

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tax_superkingdom 1

tax_phylum 1

  • Perkinsozoa · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA788929 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
17348016 17348016 PRJNA788929_P_NODE_8634_length_622_cov_55.142077_g7985_i0 PRJNA788929 8634 622 55.142077 342.98371894 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 288 2.31e-93   NR KAF4730699.1 32597 g7985 i0 72.4 39.3520900321543 199 55 96 0 597 1 140 338 KAF4730699.1 70-kilodalton heat shock protein, partial [Perkinsus olseni] diamond 24477 288 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus olseni
24995753 24995753 PRJNA788929_P_NODE_2320_length_1385_cov_28.908537_g2016_i0 PRJNA788929 2320 1385 28.908537 400.38323745 Perkinsida 27998 SAR_Eukaryotes SAR_Eukaryotes 625 3.339999999999998e-222   NR KAF4744137.1 32597 g2016 i0 78.4 13.7046931407942 389 84 84.3 0 107 1273 7 395 KAF4744137.1 Eukaryotic initiation factor 4A-III [Perkinsus olseni] diamond 18981 627 0.996810207336523 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus olseni

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;