RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA788929" and tax_clade = "Metamonada"

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tax_phylum 2

analysis 2

tax_superkingdom 1

tax_clade 1

  • Metamonada · 4 ✖

bioproject 1

  • PRJNA788929 · 4 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2045397 2045397 PRJNA788929_P_NODE_37122_length_253_cov_18.655556_g36461_i0 PRJNA788929 37122 253 18.655556 47.19855668 Tritrichomonas muris 5726 Parabasalia other_Eukaryota 279 9.67e-71   NTclustered gi|10747|emb|Z18255.1| 5726 g36461 i0 88.745 4 231 23 91 2 24 253 48 276 Tritrichomonas muris 28S ribosomal RNA blastn 1012 279 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Tritrichomonadidae Tritrichomonas Tritrichomonas muris
28348577 28348577 PRJNA788929_P_NODE_48106_length_210_cov_6.963504_g47445_i0 PRJNA788929 48106 210 6.963504 14.6233584 Anaeramoeba ignava 1746090 Root_unresolved Root_unresolved 46.6 5.95e-4   NR KAJ5079094.1 1746090 g47445 i0 73.1 0.371428571428571 26 7 37.1 0 208 131 110 135 KAJ5079094.1 hypothetical protein M0811_14617 [Anaeramoeba ignava] diamond 78 46.6 1 Eukaryota Metamonada         Anaeramoebidae Anaeramoeba Anaeramoeba ignava
28601290 28601290 PRJNA788929_P_NODE_29747_length_289_cov_29.648148_g29086_i0 PRJNA788929 29747 289 29.648148 85.68314772 Monocercomonoides exilis 2049356 Preaxostyla other_Eukaryota 50.8 8.4e-5   NR XP_067729952.1 2049356 g29086 i0 37.3 1.22491349480969 59 36 61.2 1 25 201 9 66 XP_067729952.1 uncharacterized protein MONOS_14855 [Monocercomonoides exilis] diamond 354 50.8 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida Polymastigidae Monocercomonoides Monocercomonoides exilis
29011969 29011969 PRJNA788929_P_NODE_12668_length_485_cov_32.254854_g12011_i0 PRJNA788929 12668 485 32.254854 156.4360419 Anaeramoeba ignava 1746090 Root_unresolved Root_unresolved 74.7 3.52e-12   NR KAJ5073099.1 1746090 g12011 i0 27.8 0.890721649484536 144 104 89.1 0 450 19 148 291 KAJ5073099.1 alpha-actinin sarcomeric-like protein [Anaeramoeba ignava] diamond 432 74.7 1 Eukaryota Metamonada         Anaeramoebidae Anaeramoeba Anaeramoeba ignava

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;