RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA788929", tax_clade = "Cyanobacteriota/Melainabacteria group" and tax_phylum = "Candidatus Melainabacteria"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Melainabacteria · 2 ✖

tax_kingdom 1

tax_clade 1

  • Cyanobacteriota/Melainabacteria group · 2 ✖

bioproject 1

  • PRJNA788929 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
31065016 31065016 PRJNA788929_P_NODE_16855_length_406_cov_2.789790_g16196_i0 PRJNA788929 16855 406 2.78979 11.3265474 Candidatus Obscuribacterales bacterium 2364082 Bacteria Bacteria 202 1.2900000000000001e-59   NR MFA6211949.1 2364082 g16196 i0 70.2 2.90394088669951 131 38 96.1 1 1 390 207 337 MFA6211949.1 pitrilysin family protein [Candidatus Obscuribacterales bacterium] diamond 1179 202 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria   Candidatus Obscuribacterales     Candidatus Obscuribacterales bacterium
31950156 31950156 PRJNA788929_P_NODE_24717_length_322_cov_17.795181_g24056_i0 PRJNA788929 24717 322 17.795181 57.30048282 Vampirovibrionales bacterium 2692181 Bacteria Bacteria 142 2.319999999999999e-41   NR MEB3286593.1 2692181 g24056 i0 81.2 0.791925465838509 85 16 79.2 0 24 278 48 132 MEB3286593.1 30S ribosomal protein S8 [Vampirovibrionales bacterium] diamond 255 142 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria Vampirovibriophyceae Vampirovibrionales     Vampirovibrionales bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;