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contig_metadata

23 rows where bioproject = "PRJNA785164" and tax_superkingdom = "Archaea"

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tax_superkingdom 1

  • Archaea · 23 ✖

bioproject 1

  • PRJNA785164 · 23 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26610259 26610259 PRJNA785164_P_NODE_37541_length_294_cov_2.393665_g37076_i0 PRJNA785164 37541 294 2.393665 7.0373751 archaeon 1906665 Archaea Archaea 94.7 4.409999999999999e-23   NR NDB28981.1 1906665 g37076 i0 51.8 0.846938775510204 83 40 84.7 0 259 11 1 83 NDB28981.1 thioredoxin [archaeon] diamond 249 94.7 1 Archaea               archaeon
26958530 26958530 PRJNA785164_P_NODE_60942_length_242_cov_0.911243_g60477_i0 PRJNA785164 60942 242 0.911243 2.20520806 archaeon 1906665 Archaea Archaea 55.1 2.06e-7   NR RYG69411.1 1906665 g60477 i0 62.2 0.45867768595041303 37 14 45.9 0 12 122 7 43 RYG69411.1 MAG: hypothetical protein EON64_02750, partial [archaeon] diamond 111 55.1 1 Archaea               archaeon
27811990 27811990 PRJNA785164_P_NODE_34024_length_311_cov_1.970588_g33559_i0 PRJNA785164 34024 311 1.970588 6.12852868 archaeon 1906665 Archaea Archaea 43.9 0.0329   NR RYH28500.1 1906665 g33559 i0 39.2 0.491961414790997 51 31 49.2 0 306 154 513 563 RYH28500.1 MAG: ATP-binding cassette domain-containing protein [archaeon] diamond 153 43.9 1 Archaea               archaeon
28042136 28042136 PRJNA785164_P_NODE_46365_length_264_cov_1.612565_g45900_i0 PRJNA785164 46365 264 1.612565 4.2571716 Nanobdellati 1783276 Archaea Archaea 80.1 3.29e-15   NR MEK6837693.1 2026764 g45900 i0 54.5 4.35227272727273 77 34 87.5 1 253 23 1 76 MEK6837693.1 LamG domain-containing protein [Nanoarchaeota archaeon] diamond 1149 80.5 0.995031055900621 Archaea   Nanobdellati Nanobdellota         Nanobdellota archaeon
28411793 28411793 PRJNA785164_P_NODE_48006_length_259_cov_2.172043_g47541_i0 PRJNA785164 48006 259 2.172043 5.62559137 Thermoplasmata archaeon M11B2D 1933281 Archaea Archaea 43.9 0.00802   NR PNX49262.1 1933281 g47541 i0 66.7 0.938223938223938 27 9 31.3 0 3 83 122 148 PNX49262.1 MAG: hypothetical protein BV459_00300 [Thermoplasmata archaeon M11B2D] diamond 243 43.9 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata       Thermoplasmata archaeon M11B2D
28601253 28601253 PRJNA785164_P_NODE_60427_length_242_cov_1.621302_g59962_i0 PRJNA785164 60427 242 1.621302 3.92355084 Methanoregulaceae archaeon PtaU1.Bin222 1811726 Archaea Archaea 92.4 6.73e-20   NR OPY47876.1 1811726 g59962 i0 84.3 1.28925619834711 51 8 63.2 0 172 20 6 56 OPY47876.1 MAG: hypothetical protein A4E42_00230 [Methanoregulaceae archaeon PtaU1.Bin222] diamond 312 92.4 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales Methanoregulaceae   Methanoregulaceae archaeon PtaU1.Bin222
29241892 29241892 PRJNA785164_P_NODE_57249_length_245_cov_1.343023_g56784_i0 PRJNA785164 57249 245 1.343023 3.29040635 root 1 Root_unresolved Root_unresolved 101 8.02e-23   NR MCI0557605.1 1971748 g56784 i0 77.8 1.54285714285714 63 14 77.1 0 57 245 173 235 MCI0557605.1 hypothetical protein [Nitrososphaera sp.] diamond 378 101 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae Nitrososphaera Nitrososphaera sp.
29327242 29327242 PRJNA785164_P_NODE_35089_length_306_cov_1.321888_g34624_i0 PRJNA785164 35089 306 1.321888 4.04497728 archaeon 1906665 Archaea Archaea 78.2 1.64e-15   NR MFA5358066.1 1906665 g34624 i0 50.7 1.44117647058824 73 36 71.6 0 221 3 23 95 MFA5358066.1 methyltransferase domain-containing protein [archaeon] diamond 441 78.2 1 Archaea               archaeon
29421884 29421884 PRJNA785164_P_NODE_58489_length_244_cov_0.900585_g58024_i0 PRJNA785164 58489 244 0.900585 2.1974274 Archaeoglobales archaeon 2250258 Archaea Archaea 107 9.17e-25   NR RLI82035.1 2250258 g58024 i0 62.8 0.959016393442623 78 29 95.9 0 235 2 415 492 RLI82035.1 MAG: hypothetical protein DRP04_04855 [Archaeoglobales archaeon] diamond 234 107 1 Archaea   Methanobacteriati Methanobacteriota Archaeoglobi Archaeoglobales     Archaeoglobales archaeon
29864096 29864096 PRJNA785164_P_NODE_49111_length_256_cov_1.639344_g48646_i0 PRJNA785164 49111 256 1.639344 4.19672064 Candidatus Pacearchaeota archaeon 2026773 Archaea Archaea 62.8 9.52e-10   NR MCK5606851.1 2026773 g48646 i0 42.5 0.9375 80 43 91.4 3 244 11 1 79 MCK5606851.1 methyltransferase domain-containing protein [Candidatus Pacearchaeota archaeon] diamond 240 62.8 1 Archaea Candidatus Pacearchaeota Nanobdellati           Candidatus Pacearchaeota archaeon
29905117 29905117 PRJNA785164_P_NODE_47711_length_260_cov_1.647059_g47246_i0 PRJNA785164 47711 260 1.647059 4.2823534 root 1 Root_unresolved Root_unresolved 51.6 3.13e-5   NR MEM4270779.1 2026773 g47246 i0 61.9 0.992307692307692 42 16 48.5 0 131 6 4 45 MEM4270779.1 DUF5309 family protein [Candidatus Pacearchaeota archaeon] diamond 258 52 0.992307692307692 Archaea Candidatus Pacearchaeota Nanobdellati           Candidatus Pacearchaeota archaeon
29958860 29958860 PRJNA785164_P_NODE_35151_length_306_cov_0.961373_g34686_i0 PRJNA785164 35151 306 0.961373 2.94180138 Halobacteriales archaeon 1904752 Archaea Archaea 63.9 3.94e-10   NR MFB6298912.1 1904752 g34686 i0 46.2 0.637254901960784 65 33 61.8 1 229 41 23 87 MFB6298912.1 group I intron-associated PD-(D/E)XK endonuclease [Halobacteriales archaeon] diamond 195 63.9 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales     Halobacteriales archaeon
30157462 30157462 PRJNA785164_P_NODE_25752_length_365_cov_1.582192_g25287_i0 PRJNA785164 25752 365 1.582192 5.7750008 root 1 Root_unresolved Root_unresolved 79.7 1.58e-14   NR MCI0557155.1 1971748 g25287 i0 36.2 1.73424657534247 105 67 86.3 0 362 48 166 270 MCI0557155.1 hypothetical protein [Nitrososphaera sp.] diamond 633 80.5 0.990062111801242 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae Nitrososphaera Nitrososphaera sp.
30631484 30631484 PRJNA785164_P_NODE_60373_length_242_cov_1.822485_g59908_i0 PRJNA785164 60373 242 1.822485 4.4104137 root 1 Root_unresolved Root_unresolved 100 1.23e-22   NR RLF66398.1 1906666 g59908 i0 54.4 5.87603305785124 79 36 97.9 0 6 242 209 287 RLF66398.1 MAG: phage portal protein, partial [Thermoplasmata archaeon] diamond 1422 100 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata       Thermoplasmata archaeon
30884395 30884395 PRJNA785164_P_NODE_61914_length_241_cov_0.916667_g61449_i0 PRJNA785164 61914 241 0.916667 2.20916747 root 1 Root_unresolved Root_unresolved 117 5.55e-32   NR HET8685399.1 2213 g61449 i0 74.2 2.50207468879668 66 17 82.2 0 240 43 34 99 HET8685399.1 dATP/dGTP diphosphohydrolase domain-containing protein [Methanosarcina sp.] diamond 603 118 0.991525423728814 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales Methanosarcinaceae Methanosarcina Methanosarcina sp.
30906957 30906957 PRJNA785164_P_NODE_61934_length_241_cov_0.916667_g61469_i0 PRJNA785164 61934 241 0.916667 2.20916747 archaeon 1906665 Archaea Archaea 81.6 1.98e-17   NR RYY85990.1 1906665 g61469 i0 82.6 0.572614107883817 46 8 57.3 0 140 3 21 66 RYY85990.1 MAG: hypothetical protein EON63_06560 [archaeon] diamond 138 81.6 1 Archaea               archaeon
30938481 30938481 PRJNA785164_P_NODE_31854_length_323_cov_1.232000_g31389_i0 PRJNA785164 31854 323 1.232 3.97936 archaeon 1906665 Archaea Archaea 57.4 6.73e-7   NR RYH29468.1 1906665 g31389 i0 46.3 0.882352941176471 95 50 87.3 1 40 321 101 195 RYH29468.1 MAG: hypothetical protein EON65_08405 [archaeon] diamond 285 57.4 1 Archaea               archaeon
31254305 31254305 PRJNA785164_P_NODE_46355_length_264_cov_1.612565_g45890_i0 PRJNA785164 46355 264 1.612565 4.2571716 Candidatus Woesearchaeota archaeon 2026803 Archaea Archaea 90.9 2.99e-19   NR RLE41288.1 2026803 g45890 i0 54.7 1.70454545454545 75 34 85.2 0 39 263 40 114 RLE41288.1 MAG: hypothetical protein DRJ16_06530 [Candidatus Woesearchaeota archaeon] diamond 450 90.9 1 Archaea   Nanobdellati Candidatus Woesearchaeota         Candidatus Woesearchaeota archaeon
31349359 31349359 PRJNA785164_P_NODE_36316_length_300_cov_1.356828_g35851_i0 PRJNA785164 36316 300 1.356828 4.070484 Methanomicrobia archaeon 2268195 Archaea Archaea 73.2 6.22e-13   NR MBC8521274.1 2268195 g35851 i0 32.6 0.95 95 61 94 2 300 19 75 167 MBC8521274.1 hypothetical protein [Methanomicrobia archaeon] diamond 285 73.2 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia       Methanomicrobia archaeon
31349363 31349363 PRJNA785164_P_NODE_57256_length_245_cov_1.343023_g56791_i0 PRJNA785164 57256 245 1.343023 3.29040635 Methanomicrobiales archaeon 2184052 Archaea Archaea 76.6 3.92e-14   NR MDD1677633.1 2184052 g56791 i0 60.5 0.930612244897959 76 29 93.1 1 243 16 79 153 MDD1677633.1 hypothetical protein [Methanomicrobiales archaeon] diamond 228 76.6 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales     Methanomicrobiales archaeon
31570847 31570847 PRJNA785164_P_NODE_56156_length_246_cov_1.549133_g55691_i0 PRJNA785164 56156 246 1.549133 3.81086718 Methanosarcina sp. 2213 Archaea Archaea 46.6 3.62e-4   NR HET8685956.1 2213 g55691 i0 59.5 0.451219512195122 37 14 45.1 1 134 244 1 36 HET8685956.1 hypothetical protein [Methanosarcina sp.] diamond 111 46.6 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales Methanosarcinaceae Methanosarcina Methanosarcina sp.
31665437 31665437 PRJNA785164_P_NODE_53877_length_248_cov_1.760000_g53412_i0 PRJNA785164 53877 248 1.76 4.3648 Nitrososphaerota archaeon 2026795 Archaea Archaea 52.8 2.99e-6   NR MDE1767227.1 2026795 g53412 i0 37.3 1.82661290322581 75 43 90.7 1 243 19 71 141 MDE1767227.1 hypothetical protein [Nitrososphaerota archaeon] diamond 453 52.8 1 Archaea   Thermoproteati Nitrososphaerota         Nitrososphaerota archaeon
31927822 31927822 PRJNA785164_P_NODE_21257_length_411_cov_1.757396_g20792_i0 PRJNA785164 21257 411 1.757396 7.22289756 Thermococcus 2263 Archaea Archaea 276 1.41e-86   NR MEO2151751.1 35749 g20792 i0 96.4 6 137 5 100 0 1 411 147 283 MEO2151751.1 DNA polymerase domain-containing protein [Thermococcus sp.] diamond 2466 277 0.996389891696751 Archaea   Methanobacteriati Methanobacteriota Thermococci Thermococcales Thermococcaceae Thermococcus Thermococcus sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;