RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA785164", tax_phylum = "Nitrososphaerota" and tax_superkingdom = "Archaea"

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tax_superkingdom 1

  • Archaea · 3 ✖

tax_phylum 1

  • Nitrososphaerota · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJNA785164 · 3 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29241892 29241892 PRJNA785164_P_NODE_57249_length_245_cov_1.343023_g56784_i0 PRJNA785164 57249 245 1.343023 3.29040635 root 1 Root_unresolved Root_unresolved 101 8.02e-23   NR MCI0557605.1 1971748 g56784 i0 77.8 1.54285714285714 63 14 77.1 0 57 245 173 235 MCI0557605.1 hypothetical protein [Nitrososphaera sp.] diamond 378 101 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae Nitrososphaera Nitrososphaera sp.
30157462 30157462 PRJNA785164_P_NODE_25752_length_365_cov_1.582192_g25287_i0 PRJNA785164 25752 365 1.582192 5.7750008 root 1 Root_unresolved Root_unresolved 79.7 1.58e-14   NR MCI0557155.1 1971748 g25287 i0 36.2 1.73424657534247 105 67 86.3 0 362 48 166 270 MCI0557155.1 hypothetical protein [Nitrososphaera sp.] diamond 633 80.5 0.990062111801242 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae Nitrososphaera Nitrososphaera sp.
31665437 31665437 PRJNA785164_P_NODE_53877_length_248_cov_1.760000_g53412_i0 PRJNA785164 53877 248 1.76 4.3648 Nitrososphaerota archaeon 2026795 Archaea Archaea 52.8 2.99e-6   NR MDE1767227.1 2026795 g53412 i0 37.3 1.82661290322581 75 43 90.7 1 243 19 71 141 MDE1767227.1 hypothetical protein [Nitrososphaerota archaeon] diamond 453 52.8 1 Archaea   Thermoproteati Nitrososphaerota         Nitrososphaerota archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;