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contig_metadata

24 rows where bioproject = "PRJNA785164", tax_phylum = "Myxococcota" and tax_superkingdom = "Bacteria"

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tax_superkingdom 1

  • Bacteria · 24 ✖

tax_phylum 1

  • Myxococcota · 24 ✖

tax_kingdom 1

bioproject 1

  • PRJNA785164 · 24 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27338252 27338252 PRJNA785164_P_NODE_60643_length_242_cov_0.911243_g60178_i0 PRJNA785164 60643 242 0.911243 2.20520806 Deltaproteobacteria bacterium 2026735 Bacteria Bacteria 54.3 3.04e-6   NR MBI3769051.1 2026735 g60178 i0 39.5 2.00826446280992 81 39 93 3 228 4 278 354 MBI3769051.1 hypothetical protein [Deltaproteobacteria bacterium] diamond 486 54.3 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
27568337 27568337 PRJNA785164_P_NODE_7444_length_852_cov_3.861361_g7042_i0 PRJNA785164 7444 852 3.861361 32.89879572 root 1 Root_unresolved Root_unresolved 178 3.369999999999999e-52   NR TLM66027.1 2026735 g7042 i0 62 1.36971830985915 129 48 45.4 1 3 389 31 158 TLM66027.1 MAG: adenine methyltransferase [Deltaproteobacteria bacterium] diamond 1167 178 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
27622499 27622499 PRJNA785164_P_NODE_64184_length_226_cov_2.686275_g63719_i0 PRJNA785164 64184 226 2.686275 6.0709815 Deltaproteobacteria bacterium 2026735 Bacteria Bacteria 54.3 2.59e-6   NR MCG6910469.1 2026735 g63719 i0 45.2 1.9646017699115 73 32 96.9 3 7 225 984 1048 MCG6910469.1 hypothetical protein [Deltaproteobacteria bacterium] diamond 444 54.3 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
28642122 28642122 PRJNA785164_P_NODE_58587_length_244_cov_0.900585_g58122_i0 PRJNA785164 58587 244 0.900585 2.1974274 Myxococcia 32015 Bacteria Bacteria 133 1.7e-34   NR HMY17652.1 57 g58122 i0 72.8 10.9549180327869 81 22 99.6 0 243 1 355 435 HMY17652.1 amidohydrolase family protein [Polyangium sp.] diamond 2673 133 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Polyangiaceae Polyangium Polyangium sp.
28821838 28821838 PRJNA785164_P_NODE_35508_length_304_cov_1.000000_g35043_i0 PRJNA785164 35508 304 1 3.04 Myxococcota bacterium 2818507 Bacteria Bacteria 90.1 1.71e-18   NR HNC96677.1 2818507 g35043 i0 53.1 0.799342105263158 81 38 79.9 0 269 27 294 374 HNC96677.1 DUF3987 domain-containing protein [Myxococcota bacterium] diamond 243 90.1 1 Bacteria   Pseudomonadati Myxococcota         Myxococcota bacterium
29011930 29011930 PRJNA785164_P_NODE_44508_length_270_cov_1.228426_g44043_i0 PRJNA785164 44508 270 1.228426 3.3167502 Deltaproteobacteria bacterium 2026735 Bacteria Bacteria 83.6 2.15e-16   NR NQW45591.1 2026735 g44043 i0 44.3 1.8 88 49 97.8 0 266 3 355 442 NQW45591.1 FAD-dependent oxidoreductase [Deltaproteobacteria bacterium] diamond 486 83.6 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
29043340 29043340 PRJNA785164_P_NODE_47908_length_260_cov_1.080214_g47443_i0 PRJNA785164 47908 260 1.080214 2.8085564 Deltaproteobacteria bacterium 2026735 Bacteria Bacteria 46.2 0.0011   NR NIS77788.1 2026735 g47443 i0 44.6 0.75 65 31 69.2 3 81 260 75 139 NIS77788.1 hypothetical protein [Deltaproteobacteria bacterium] diamond 195 46.2 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
29043346 29043346 PRJNA785164_P_NODE_54728_length_248_cov_0.880000_g54263_i0 PRJNA785164 54728 248 0.88 2.1824 Myxococcus virescens 83456 Bacteria Bacteria 63.2 2.31e-10   NR WP_090487439.1 83456 g54263 i0 41 1.00403225806452 83 48 99.2 1 247 2 33 115 WP_090487439.1 hypothetical protein [Myxococcus virescens] diamond 249 63.2 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales Myxococcaceae Myxococcus Myxococcus virescens
29201200 29201200 PRJNA785164_P_NODE_61109_length_242_cov_0.911243_g60644_i0 PRJNA785164 61109 242 0.911243 2.20520806 Deltaproteobacteria bacterium 2026735 Bacteria Bacteria 99.4 4.149999999999999e-23   NR MBW2035729.1 2026735 g60644 i0 62.5 0.991735537190083 80 29 99.2 1 3 242 186 264 MBW2035729.1 terminase family protein [Deltaproteobacteria bacterium] diamond 240 99.4 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
29263994 29263994 PRJNA785164_P_NODE_62249_length_241_cov_0.916667_g61784_i0 PRJNA785164 62249 241 0.916667 2.20916747 Pendulispora brunnea 2905690 Bacteria Bacteria 45.8 0.00273   NR WP_394847423.1 2905690 g61784 i0 37.3 0.734439834024896 59 37 73.4 0 237 61 210 268 WP_394847423.1 hypothetical protein [Pendulispora brunnea] diamond 177 45.8 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales Pendulisporaceae Pendulispora Pendulispora brunnea
29674318 29674318 PRJNA785164_P_NODE_51890_length_250_cov_1.672316_g51425_i0 PRJNA785164 51890 250 1.672316 4.18079 Deltaproteobacteria bacterium 2026735 Bacteria Bacteria 72.8 2.58e-13   NR NJK32591.1 2026735 g51425 i0 50 0.936 78 37 91.2 1 2 229 16 93 NJK32591.1 hypothetical protein [Deltaproteobacteria bacterium] diamond 234 72.8 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
29705781 29705781 PRJNA785164_P_NODE_63490_length_232_cov_2.396226_g63025_i0 PRJNA785164 63490 232 2.396226 5.55924432 Polyangiaceae bacterium 2268199 Bacteria Bacteria 110 2.4e-28   NR HWO13585.1 2268199 g63025 i0 68.8 0.995689655172414 77 23 99.6 1 231 1 43 118 HWO13585.1 molybdopterin cofactor-binding domain-containing protein [Polyangiaceae bacterium] diamond 231 110 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Polyangiaceae   Polyangiaceae bacterium
30338472 30338472 PRJNA785164_P_NODE_53192_length_249_cov_0.875000_g52727_i0 PRJNA785164 53192 249 0.875 2.17875 Deltaproteobacteria bacterium 2026735 Bacteria Bacteria 119 3.56e-30   NR MEI7672950.1 2026735 g52727 i0 67.5 2.91566265060241 80 26 96.4 0 247 8 48 127 MEI7672950.1 transposase [Deltaproteobacteria bacterium] diamond 726 119 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
30464807 30464807 PRJNA785164_P_NODE_49133_length_256_cov_1.497268_g48668_i0 PRJNA785164 49133 256 1.497268 3.83300608 Myxococcota bacterium 2818507 Bacteria Bacteria 98.2 1.3700000000000002e-21   NR HNC96677.1 2818507 g48668 i0 66.7 0.7734375 66 22 77.3 0 199 2 454 519 HNC96677.1 DUF3987 domain-containing protein [Myxococcota bacterium] diamond 198 98.2 1 Bacteria   Pseudomonadati Myxococcota         Myxococcota bacterium
30527533 30527533 PRJNA785164_P_NODE_54573_length_248_cov_0.880000_g54108_i0 PRJNA785164 54573 248 0.88 2.1824 Deltaproteobacteria bacterium 2026735 Bacteria Bacteria 46.2 0.0014   NR MBE7413838.1 2026735 g54108 i0 41.8 0.810483870967742 67 39 81 0 10 210 116 182 MBE7413838.1 hypothetical protein [Deltaproteobacteria bacterium] diamond 201 46.2 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
31064976 31064976 PRJNA785164_P_NODE_53635_length_249_cov_0.875000_g53170_i0 PRJNA785164 53635 249 0.875 2.17875 Polyangiaceae bacterium 2268199 Bacteria Bacteria 92.4 1.3400000000000002e-21   NR HEY1536102.1 2268199 g53170 i0 69.6 0.831325301204819 69 21 83.1 0 3 209 85 153 HEY1536102.1 DUF5655 domain-containing protein [Polyangiaceae bacterium] diamond 207 92.4 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Polyangiaceae   Polyangiaceae bacterium
31539156 31539156 PRJNA785164_P_NODE_56416_length_246_cov_0.890173_g55951_i0 PRJNA785164 56416 246 0.890173 2.18982558 Polyangium sp. 15x6 3042687 Bacteria Bacteria 51.6 2.74e-5   NR WP_282424953.1 3042687 g55951 i0 35.3 0.829268292682927 68 44 82.9 0 6 209 173 240 WP_282424953.1 peptidoglycan-binding domain-containing protein [Polyangium sp. 15x6] diamond 204 51.6 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Polyangiaceae Polyangium Polyangium sp. 15x6
31633835 31633835 PRJNA785164_P_NODE_58976_length_244_cov_0.900585_g58511_i0 PRJNA785164 58976 244 0.900585 2.1974274 Deltaproteobacteria bacterium 2026735 Bacteria Bacteria 86.7 1.32e-17   NR MBI3554690.1 2026735 g58511 i0 55.6 0.995901639344262 81 34 99.6 2 244 2 163 241 MBI3554690.1 primary-amine oxidase [Deltaproteobacteria bacterium] diamond 243 86.7 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
32045217 32045217 PRJNA785164_P_NODE_54838_length_248_cov_0.880000_g54373_i0 PRJNA785164 54838 248 0.88 2.1824 Polyangiaceae bacterium 2268199 Bacteria Bacteria 120 4.589999999999999e-31   NR HET9958005.1 2268199 g54373 i0 64.6 1.98387096774194 82 29 99.2 0 3 248 32 113 HET9958005.1 amino acid--[acyl-carrier-protein] ligase [Polyangiaceae bacterium] diamond 492 120 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Polyangiaceae   Polyangiaceae bacterium
32108419 32108419 PRJNA785164_P_NODE_61918_length_241_cov_0.916667_g61453_i0 PRJNA785164 61918 241 0.916667 2.20916747 Deltaproteobacteria bacterium 2026735 Bacteria Bacteria 42.4 0.0477   NR MBN8540815.1 2026735 g61453 i0 41.7 0.597510373443983 48 28 59.8 0 62 205 164 211 MBN8540815.1 fatty acid desaturase [Deltaproteobacteria bacterium] diamond 144 42.4 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
32140137 32140137 PRJNA785164_P_NODE_54218_length_248_cov_0.880000_g53753_i0 PRJNA785164 54218 248 0.88 2.1824 Haliangium sp. 2663208 Bacteria Bacteria 57 3.68e-7   NR HWN67418.1 2663208 g53753 i0 64.4 0.544354838709677 45 16 54.4 0 141 7 320 364 HWN67418.1 hypothetical protein [Haliangium sp.] diamond 135 57 1 Bacteria   Pseudomonadati Myxococcota   Haliangiales Kofleriaceae Haliangium Haliangium sp.
32339402 32339402 PRJNA785164_P_NODE_47199_length_262_cov_1.222222_g46734_i0 PRJNA785164 47199 262 1.222222 3.20222164 Bacteria 2 Bacteria Bacteria 120 3.96e-30   NR HTR49814.1 2212474 g46734 i0 68.7 4.68320610687023 83 26 95 0 2 250 305 387 HTR49814.1 IS3 family transposase [Kofleriaceae bacterium] diamond 1227 120 1 Bacteria   Pseudomonadati Myxococcota   Haliangiales Kofleriaceae   Kofleriaceae bacterium
32645626 32645626 PRJNA785164_P_NODE_54380_length_248_cov_0.880000_g53915_i0 PRJNA785164 54380 248 0.88 2.1824 Polyangiaceae bacterium 2268199 Bacteria Bacteria 115 1.0500000000000001e-30   NR MBK9260809.1 2268199 g53915 i0 72.7 0.931451612903226 77 21 93.1 0 233 3 7 83 MBK9260809.1 hypothetical protein [Polyangiaceae bacterium] diamond 231 115 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Polyangiaceae   Polyangiaceae bacterium
32708836 32708836 PRJNA785164_P_NODE_55600_length_247_cov_0.885057_g55135_i0 PRJNA785164 55600 247 0.885057 2.18609079 Deltaproteobacteria bacterium 2026735 Bacteria Bacteria 73.2 4.2e-13   NR HAR97047.1 2026735 g55135 i0 50.7 0.910931174089069 75 36 89.9 1 2 223 231 305 HAR97047.1 hypothetical protein [Deltaproteobacteria bacterium] diamond 225 73.2 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;