RNAquarium Metadata Server
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contig_metadata

1 row where bioproject = "PRJNA785164" and tax_phylum = "Candidatus Berkelbacteria"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Berkelbacteria · 1 ✖

tax_clade 1

bioproject 1

  • PRJNA785164 · 1 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26832196 26832196 PRJNA785164_P_NODE_54741_length_248_cov_0.880000_g54276_i0 PRJNA785164 54741 248 0.88 2.1824 Candidatus Berkelbacteria bacterium 2053521 Bacteria Bacteria 118 7.27e-29   NR MCR4308382.1 2053521 g54276 i0 76.1 0.858870967741935 71 17 85.9 0 20 232 528 598 MCR4308382.1 phage major capsid protein [Candidatus Berkelbacteria bacterium] diamond 213 118 1 Bacteria Bacteria candidate phyla   Candidatus Berkelbacteria         Candidatus Berkelbacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;